Basic Information:

  VIRBase ID:  

VHID00617215

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          Arl14ep:  NM_001362864     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	Arl14ep
miRBase Accession/Entrez ID	MIMAT0005552	212772
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2700007P21Rik//4930448O08Rik//ARF7EP

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Arl14ep	chr2:106963556-106963557(-) m6A 3'UTR       24981863 chr2:106963621-106963622(-) m6A 3'UTR       24981863//25569111 chr2:106963643-106963644(-) m6A 3'UTR       24981863//25569111 chr2:106963673-106963674(-) m6A 3'UTR       24981863//25569111 chr2:106963685-106963686(-) m6A 3'UTR       24981863//25569111 chr2:106963717-106963718(-) m6A 3'UTR       25569111 chr2:106964418-106964419(-) m6A 3'UTR       24981863//25456834//22608085 chr2:106964439-106964440(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr2:106964447-106964448(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr2:106964463-106964464(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr2:106964478-106964479(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr2:106964550-106964551(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr2:106964564-106964565(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr2:106964581-106964582(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr2:106964636-106964637(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr2:106964650-106964651(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr2:106964667-106964668(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr2:106964715-106964716(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr2:106964767-106964768(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr2:106965386-106965387(-) m6A exon//intron       25683224//25456834//24981863//25569111 chr2:106965403-106965404(-) m6A exon//intron       25683224//25456834//24981863//25569111 chr2:106965429-106965430(-) m6A CDS//exon       25683224//25456834//24981863//25569111 chr2:106965556-106965557(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111 chr2:106965580-106965581(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111 chr2:106967172-106967173(-) m6A CDS//exon       25456834//25412662//24981863//25569111 chr2:106967186-106967187(-) m6A CDS//exon       25456834//25412662//24981863//25569111 chr2:106967220-106967221(-) m6A CDS//exon       25456834//25412662//24981863//25569111 chr2:106967417-106967418(-) m6A exon//intron       25456834//25412662//24981863//25569111 chr2:106969033-106969034(-) m6A exon//intron       25569111 chr2:106969083-106969084(-) m6A CDS//exon       25456834//25412662//24981863//25569111//22608085 chr2:106969176-106969177(-) m6A CDS//exon       25456834//25412662//24981863//25569111//22608085 chr2:106969231-106969232(-) m6A CDS//exon       25456834//25412662//24981863//25569111//22608085 chr2:106969361-106969362(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr2:106969409-106969410(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr2:106969439-106969440(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr2:106969532-106969533(-) m6A 5'UTR//exon       25683224//25456834//25412662//24981863//25569111 chr2:106974296-106974297(-) m6A 5'UTR//exon       25412662//24981863//25569111 chr2:106974316-106974317(-) m6A 5'UTR//exon       25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Arl14ep	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: Arl14ep

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar