Basic Information:

  VIRBase ID:  

VHID00617213

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          Iffo2:  NM_183148     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	Iffo2
miRBase Accession/Entrez ID	MIMAT0005552	212632
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	C79267

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Iffo2	chr4:139574739-139574740(+) m6A 5'UTR//intron       25683224//25412662//24981863//25569111 chr4:139575186-139575187(+) m6A CDS//intron       25412662//24981863//25569111 chr4:139575235-139575236(+) m6A CDS//intron       25412662//24981863//25569111 chr4:139575262-139575263(+) m6A CDS//intron       25412662//24981863//25569111 chr4:139575409-139575410(+) m6A CDS//intron       25412662//24981863//25569111 chr4:139575460-139575461(+) m6A CDS//intron       25412662//24981863//25569111 chr4:139603224-139603225(+) m6A 5'UTR//CDS       25683224//25412662//24981863//25569111 chr4:139603241-139603242(+) m6A CDS       25683224//25412662//24981863//25569111 chr4:139603249-139603250(+) m6A CDS       25683224//25412662//24981863//25569111 chr4:139603259-139603260(+) m6A CDS       25683224//25412662//24981863//25569111 chr4:139606431-139606432(+) m6A CDS       25683224//25412662//24981863 chr4:139606437-139606438(+) m6A CDS       25683224//25412662//24981863 chr4:139606470-139606471(+) m6A CDS       25683224 chr4:139606476-139606477(+) m6A CDS       25683224 chr4:139606533-139606534(+) m6A CDS       25683224//22608085 chr4:139607647-139607648(+) m6A CDS       25683224 chr4:139607707-139607708(+) m6A CDS       25683224 chr4:139613800-139613801(+) m6A CDS       25683224 chr4:139613852-139613853(+) m6A CDS       25683224//25412662 chr4:139614035-139614036(+) m6A CDS       25683224//25412662 chr4:139614058-139614059(+) m6A CDS       25683224//25412662 chr4:139614083-139614084(+) m6A CDS       25683224//25412662 chr4:139614100-139614101(+) m6A CDS       25412662//24981863 chr4:139614961-139614962(+) m6A CDS       25683224//25412662//24981863 chr4:139615026-139615027(+) m6A CDS       25683224//25412662//24981863 chr4:139615057-139615058(+) m6A CDS       25683224//25412662//24981863//25569111 chr4:139616392-139616393(+) m6A CDS       25683224//25412662//24981863//25569111 chr4:139616523-139616524(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr4:139616557-139616558(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr4:139616644-139616645(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr4:139616745-139616746(+) m6A 3'UTR       25456834//24981863//25569111 chr4:139616819-139616820(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr4:139616886-139616887(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr4:139616976-139616977(+) m6A 3'UTR       25683224//24981863//25569111 chr4:139617047-139617048(+) m6A 3'UTR       25683224//24981863//25569111 chr4:139617063-139617064(+) m6A 3'UTR       25683224//24981863//25569111 chr4:139617075-139617076(+) m6A 3'UTR       25683224//24981863//25569111 chr4:139617081-139617082(+) m6A 3'UTR       25683224//24981863//25569111 chr4:139617088-139617089(+) m6A 3'UTR       25683224//24981863//25569111 chr4:139617096-139617097(+) m6A 3'UTR       24981863//25569111 chr4:139617104-139617105(+) m6A 3'UTR       24981863//25569111 chr4:139617155-139617156(+) m6A 3'UTR       25569111 chr4:139617165-139617166(+) m6A 3'UTR       25569111 chr4:139619873-139619874(+) m6A 3'UTR       25683224 chr4:139619880-139619881(+) m6A 3'UTR       25683224 chr4:139619946-139619947(+) m6A 3'UTR       25683224//25412662//24981863//25569111//22575960 chr4:139619952-139619953(+) m6A 3'UTR       25683224//25412662//24981863//25569111//22575960 chr4:139619972-139619973(+) m6A 3'UTR       25683224//25412662//24981863//25569111//22575960 chr4:139619992-139619993(+) m6A 3'UTR       25683224//24981863//25569111 chr4:139620072-139620073(+) m6A 3'UTR       24981863//25569111 chr4:139620094-139620095(+) m6A 3'UTR       24981863//25569111 chr4:139620132-139620133(+) m6A 3'UTR       24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: Iffo2

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar