Basic Information:

  VIRBase ID:  

VHID00617199

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          Fam91a1:  NM_145959     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	Fam91a1
miRBase Accession/Entrez ID	MIMAT0005552	210998
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	AV220772//BC033609//D15Ertd621//D15Ertd621e//mKIAA0493//SKIN

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Fam91a1	chr15:58415490-58415491(+) m6A 5'UTR       25412662//24981863//25569111 chr15:58415501-58415502(+) m6A 5'UTR       25412662//24981863//25569111 chr15:58415570-58415571(+) m6A 5'UTR       25412662//24981863//25569111 chr15:58415709-58415710(+) m6A CDS       25569111 chr15:58454849-58454850(+) m6A CDS       24981863//25569111 chr15:58455053-58455054(+) m6A 3'UTR       25456834//24981863//25569111//22608085//22575960 chr15:58455155-58455156(+) m6A 3'UTR       25456834//24981863//25569111//22608085//22575960 chr15:58455178-58455179(+) m6A 3'UTR       25456834//24981863//25569111//22608085//22575960 chr15:58455185-58455186(+) m6A 3'UTR       25456834//24981863//25569111//22608085//22575960 chr15:58455273-58455274(+) m6A 3'UTR       25456834//25412662//24981863//25569111//22608085 chr15:58455279-58455280(+) m6A 3'UTR       25456834//25412662//24981863//25569111//22608085 chr15:58455336-58455337(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr15:58455417-58455418(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr15:58455470-58455471(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr15:58455508-58455509(+) m6A 3'UTR       25456834//25412662//24981863//25569111//22608085 chr15:58455572-58455573(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr15:58455604-58455605(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr15:58455724-58455725(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr15:58455811-58455812(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:58455841-58455842(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:58455854-58455855(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:58455861-58455862(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr15:58456043-58456044(+) m6A 3'UTR       25456834//25412662//24981863//25569111 chr15:58456050-58456051(+) m6A 3'UTR       25456834//25412662//24981863//25569111 chr15:58456076-58456077(+) m6A 3'UTR       25456834//25412662//24981863//25569111 chr15:58456145-58456146(+) m6A 3'UTR       24981863//25569111//26404942 chr15:58456173-58456174(+) m6A 3'UTR       24981863//25569111 chr15:58456232-58456233(+) m6A 3'UTR       25569111 chr15:58456730-58456731(+) m6A 3'UTR       24981863 chr15:58456739-58456740(+) m6A 3'UTR       24981863 chr15:58456757-58456758(+) m6A 3'UTR       24981863 chr15:58456974-58456975(+) m6A 3'UTR       25412662 chr15:58457084-58457085(+) m6A 3'UTR       25412662//24981863//22608085 chr15:58457350-58457351(+) m6A 3'UTR       24981863//22608085 chr15:58457374-58457375(+) m6A 3'UTR       24981863//22608085 chr15:58457408-58457409(+) m6A 3'UTR       24981863 chr15:58457445-58457446(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Fam91a1	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: Fam91a1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar