Basic Information:

  VIRBase ID:  

VHID00617138

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          Edem1:  NM_138677     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	Edem1
miRBase Accession/Entrez ID	MIMAT0005552	192193
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	A130059K23Rik//EDEM//mKIAA0212

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Edem1	chr6:108828881-108828882(+) m6A CDS       25412662//25569111 chr6:108828929-108828930(+) Y CDS//exon       26075521 chr6:108828967-108828968(+) m6A CDS       25412662//25569111 chr6:108828984-108828985(+) m6A CDS       25412662//25569111 chr6:108828996-108828997(+) m6A CDS       25412662//25569111 chr6:108829229-108829230(+) m6A CDS       25683224//25569111 chr6:108836442-108836443(+) m6A exon//intron       25683224 chr6:108855580-108855581(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22575960 chr6:108855586-108855587(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22575960 chr6:108855591-108855592(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22575960 chr6:108855763-108855764(+) m6A 3'UTR       25456834//24981863//22608085 chr6:108856453-108856454(+) m6A 3'UTR       25683224 chr6:108856512-108856513(+) m6A 3'UTR       25683224//24981863 chr6:108856574-108856575(+) m6A 3'UTR       24981863 chr6:108858746-108858747(+) m6A 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Edem1	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: Edem1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar