Basic Information:

  VIRBase ID:  

VHID00616988

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          Smg6:  NM_001002764     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	Smg6
miRBase Accession/Entrez ID	MIMAT0005552	103677
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	AI317223//AU041178

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Smg6	chr11:74925956-74925957(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:74928995-74928996(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:74929005-74929006(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:74929014-74929015(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:74929020-74929021(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:74929068-74929069(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:74929085-74929086(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:74929096-74929097(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:74929205-74929206(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:74929258-74929259(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:74929270-74929271(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:74929278-74929279(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:74929286-74929287(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:74929320-74929321(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:74929325-74929326(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:74929360-74929361(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:74929482-74929483(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:74929492-74929493(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:74929531-74929532(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:74929643-74929644(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:74929820-74929821(+) m6A CDS       25683224//24981863//25412662//25569111 chr11:74929914-74929915(+) m6A CDS       25683224//24981863//25569111 chr11:74929937-74929938(+) m6A CDS       25683224//25456834//24981863//25569111 chr11:74929972-74929973(+) m6A CDS       25683224//25456834//24981863//25569111 chr11:74929985-74929986(+) m6A CDS       25683224//25456834//24981863//25569111 chr11:74930085-74930086(+) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085 chr11:74930094-74930095(+) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085 chr11:74930100-74930101(+) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085 chr11:74930193-74930194(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr11:74930270-74930271(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr11:74930276-74930277(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr11:74930311-74930312(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr11:74930333-74930334(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr11:74930408-74930409(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr11:74930437-74930438(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr11:74930556-74930557(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr11:74930610-74930611(+) m6A CDS       25683224 chr11:74930624-74930625(+) m6A CDS       25683224//25412662 chr11:74930676-74930677(+) m6A CDS       25683224//25412662//22608085 chr11:74930705-74930706(+) m6A CDS       25683224//25412662//22608085 chr11:74931582-74931583(+) m6A CDS       25683224//25412662//22608085 chr11:75139254-75139255(+) m6A 3'UTR//CDS//exon       25683224//25412662 chr11:75139316-75139317(+) m6A 3'UTR//CDS//exon       25683224//25412662//24981863 chr11:75139353-75139354(+) m6A 3'UTR//CDS//exon       25683224//25412662//24981863 chr11:75142778-75142779(+) m6A 3'UTR//CDS       25683224//25412662//24981863 chr11:75142833-75142834(+) m6A 3'UTR//CDS       25683224//25412662//24981863 chr11:75156173-75156174(+) m6A 3'UTR//CDS       25683224//25412662//24981863 chr11:75156210-75156211(+) m6A 3'UTR//CDS       25683224//25412662 chr11:75159213-75159214(+) m6A 3'UTR//CDS       25683224//25412662//22608085 chr11:75159304-75159305(+) m6A 3'UTR//CDS       25683224//22608085 chr11:75159341-75159342(+) m6A 3'UTR//CDS       25683224//22608085 chr11:75159370-75159371(+) m6A 3'UTR//CDS       25683224 chr11:75159380-75159381(+) m6A 3'UTR//CDS       25683224 chr11:75159697-75159698(+) m6A exon//intron       25683224 chr11:75162870-75162871(+) m6A 3'UTR//CDS//exon       24981863//25569111 chr11:75162912-75162913(+) m6A 3'UTR//CDS//exon       25683224//25412662//24981863//25569111 chr11:75162954-75162955(+) m6A 3'UTR//exon       25683224//25412662//24981863//25569111 chr11:75163056-75163057(+) m6A 3'UTR//exon       25683224//25412662//24981863//25569111 chr11:75163063-75163064(+) m6A 3'UTR//exon       25683224//25412662//24981863//25569111 chr11:75163144-75163145(+) m6A 3'UTR//exon       25683224//24981863//25569111 chr11:75163153-75163154(+) m6A 3'UTR//exon       25683224//24981863//25569111 chr11:75163212-75163213(+) m6A 3'UTR       25683224//24981863//25569111 chr11:75164248-75164249(+) m6A 3'UTR       25683224//25412662//25569111 chr11:75164260-75164261(+) m6A 3'UTR       25683224//25412662//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: Smg6

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar