Basic Information:

  VIRBase ID:  

VHID00616969

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          Ttll3:  NM_133923     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	Ttll3
miRBase Accession/Entrez ID	MIMAT0005552	101100
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	4833441J24Rik//AI450050

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Ttll3	chr6:113341703(+) A-I      intronic chr6:113341635(+) A-I      intronic chr6:113341639(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Ttll3	chr6:113391641(+) A-I intron -    22524474 chr6:113391645(+) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ttll3	chr6:113389261-113389262(+) m6A 5'UTR       24981863//25569111//26404942//22608085 chr6:113389324-113389325(+) m6A 5'UTR       25412662//24981863//25569111//22608085 chr6:113389379-113389380(+) m6A 5'UTR       25412662//24981863//25569111//22608085 chr6:113389440-113389441(+) m6A 5'UTR       25412662//24981863//25569111//22608085 chr6:113389601-113389602(+) m6A intron       25683224//25412662//24981863 chr6:113390804-113390805(+) m6A exon//intron       25412662 chr6:113398892-113398893(+) m6A CDS//intron       25412662 chr6:113399669-113399670(+) m6A CDS//exon//intron       25412662 chr6:113401320-113401321(+) m6A CDS//exon//intron       25683224//25412662 chr6:113401352-113401353(+) m6A CDS//exon//intron       25683224//25412662 chr6:113401412-113401413(+) m6A CDS//exon//intron       25683224//25412662//22608085 chr6:113401424-113401425(+) m6A CDS//exon//intron       25683224//25412662//22608085 chr6:113405348-113405349(+) m6A 3'UTR//CDS//exon       25412662//22608085 chr6:113405387-113405388(+) m6A 3'UTR//CDS//exon       25412662//22608085 chr6:113405405-113405406(+) m6A 3'UTR//CDS//exon       25412662//22608085 chr6:113407220-113407221(+) m6A 3'UTR//CDS//exon       25569111 chr6:113407314-113407315(+) m6A 3'UTR//CDS//exon       25683224//24981863//25569111 chr6:113407340-113407341(+) m6A 3'UTR//CDS//exon       25683224//24981863//25569111 chr6:113407367-113407368(+) m6A 3'UTR//CDS//exon       25683224//25412662//24981863//25569111 chr6:113407409-113407410(+) m6A 3'UTR//CDS//exon       25683224//25412662//24981863//25569111 chr6:113407415-113407416(+) m6A 3'UTR//CDS//exon       25683224//25412662//24981863//25569111 chr6:113408937-113408938(+) m6A 3'UTR//CDS//exon       25683224//25412662//24981863//25569111 chr6:113409097-113409098(+) m6A 3'UTR//CDS//exon       25683224//25412662//24981863//25569111 chr6:113409152-113409153(+) m6A 3'UTR//CDS//exon       25683224//25412662//24981863//25569111 chr6:113409170-113409171(+) m6A 3'UTR//CDS//exon       25683224//25412662//24981863//25569111 chr6:113409296-113409297(+) m6A 3'UTR//CDS//exon       25412662//24981863//25569111 chr6:113409397-113409398(+) m6A 3'UTR//intron       24981863 chr6:113409409-113409410(+) m6A 3'UTR//intron       24981863 chr6:113412878-113412879(+) m6A CDS//exon//intron       25412662//24981863//25569111 chr6:113412939-113412940(+) m6A CDS//exon//intron       25412662//24981863//25569111 chr6:113413018-113413019(+) m6A CDS//exon       25412662//24981863//25569111 chr6:113413692-113413693(+) m6A CDS//intron       25412662//24981863//25569111 chr6:113413944-113413945(+) m6A CDS//exon       25412662//24981863//25569111 chr6:113414079-113414080(+) m6A 3'UTR//CDS//exon       25683224//25412662//24981863 chr6:113414160-113414161(+) m6A 3'UTR//CDS//exon       25683224//25412662//24981863//25569111 chr6:113414178-113414179(+) m6A 3'UTR//CDS//exon       25683224//25412662//24981863//25569111 chr6:113414217-113414218(+) m6A 3'UTR//CDS//exon       25683224//25412662//24981863//25569111 chr6:113414230-113414231(+) m6A 3'UTR//CDS//exon       25683224//25412662//24981863//25569111 chr6:113414236-113414237(+) m6A 3'UTR//CDS//exon       25683224//25412662//24981863//25569111 chr6:113414347-113414348(+) m6A 3'UTR//exon       25683224//25412662//24981863//25569111 chr6:113414401-113414402(+) m6A 3'UTR//exon       25683224//25412662//24981863//25569111 chr6:113414487-113414488(+) m6A 3'UTR//exon       25683224//24981863//25412662//25569111 chr6:113414521-113414522(+) m6A 3'UTR//exon       25683224//24981863

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: Ttll3

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar