Basic Information:

  VIRBase ID:  

VHID00616943

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          Gorab:  NM_001313738     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	Gorab
miRBase Accession/Entrez ID	MIMAT0005552	98376
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	NTKL-//NTKL-BP1//Scyl1//SCYL1-BP1//Scyl1bp1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Gorab	chr1:163385568-163385569(-) Y 3'UTR//exon       26075521 chr1:163385812-163385813(-) m6A 3'UTR       24981863 chr1:163385820-163385821(-) m6A 3'UTR       24981863 chr1:163385837-163385838(-) m6A 3'UTR       24981863 chr1:163386192-163386193(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr1:163386277-163386278(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:163386301-163386302(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:163386306-163386307(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:163386347-163386348(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:163386382-163386383(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:163386396-163386397(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:163386453-163386454(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr1:163386474-163386475(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr1:163386489-163386490(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr1:163386609-163386610(-) m6A 3'UTR//CDS       25683224//25412662//24981863//25569111 chr1:163386635-163386636(-) m6A 3'UTR//CDS       25683224//25412662//24981863//25569111 chr1:163392448-163392449(-) m6A 3'UTR//CDS       24981863 chr1:163392519-163392520(-) m6A 3'UTR//CDS       24981863 chr1:163392527-163392528(-) m6A 3'UTR//CDS       24981863 chr1:163392539-163392540(-) m6A 3'UTR//CDS       24981863 chr1:163394554-163394555(-) m6A exon//intron       24981863 chr1:163394655-163394656(-) m6A CDS//exon       25412662//24981863 chr1:163396897-163396898(-) m6A CDS//exon       25412662//24981863 chr1:163396903-163396904(-) m6A CDS//exon       25412662//24981863 chr1:163397130-163397131(-) m6A CDS//exon       - chr1:163397158-163397159(-) m6A CDS//exon       24981863 chr1:163403538-163403539(-) m6A CDS//exon       25683224//24981863//25569111 chr1:163403662-163403663(-) m6A 5'UTR       24981863

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: Gorab

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar