Basic Information:

  VIRBase ID:  

VHID00616853

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          Brd8:  NM_001361136     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	Brd8
miRBase Accession/Entrez ID	MIMAT0005552	78656
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2610007E11Rik//4432404P07Rik//p12//S//SMAP

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Brd8	chr18:34603764-34603765(-) m6A CDS//exon       22608085 chr18:34605506-34605507(-) m6A CDS//exon       24981863//22608085 chr18:34606442-34606443(-) m6A CDS//intron       25683224//25412662//24981863//22608085 chr18:34606698-34606699(-) m6A CDS//exon       25683224//25412662//24981863//22608085 chr18:34607043-34607044(-) m6A CDS//exon       25683224//25412662//24981863//25569111 chr18:34607105-34607106(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111 chr18:34607128-34607129(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111 chr18:34607141-34607142(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr18:34607155-34607156(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr18:34607236-34607237(-) m6A CDS//exon       25683224//25456834//24981863//25412662//25569111//22608085 chr18:34607270-34607271(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr18:34607294-34607295(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr18:34607312-34607313(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr18:34607326-34607327(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr18:34607778-34607779(-) m6A CDS//exon       25683224//25412662//24981863//25569111 chr18:34607799-34607800(-) m6A CDS//exon       25683224//25412662//24981863//25569111 chr18:34607809-34607810(-) m6A CDS//exon       25683224//25412662//24981863//25569111 chr18:34607817-34607818(-) m6A CDS//exon       25683224//25412662//24981863//25569111 chr18:34607874-34607875(-) m6A CDS//exon       25683224//25412662//24981863//25569111 chr18:34610400-34610401(-) m6A exon//intron       25456834 chr18:34610412-34610413(-) m6A CDS//exon//intron       25456834 chr18:34610490-34610491(-) m6A CDS//exon//intron       24981863//25456834 chr18:34613244-34613245(-) m6A CDS//exon       25412662//24981863 chr18:34613251-34613252(-) m6A CDS//exon       25412662//24981863 chr18:34613274-34613275(-) m6A CDS//exon       25412662//24981863 chr18:34614463-34614464(-) m6A CDS//exon       24981863 chr18:34614485-34614486(-) m6A CDS//exon       24981863 chr18:34614509-34614510(-) m6A CDS//exon       24981863 chr18:34621953-34621954(-) m6A exon//intron       25569111//22608085 chr18:34621969-34621970(-) m6A exon//intron       25569111 chr18:34623457-34623458(-) m6A CDS//exon       25569111 chr18:34624543-34624544(-) m6A CDS//exon       24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Brd8	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: Brd8

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar