Basic Information:

  VIRBase ID:  

VHID00616832

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          Wdr82:  NM_029896     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	Wdr82
miRBase Accession/Entrez ID	MIMAT0005552	77305
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	9430077D24Rik//CDW5/WDR82

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Wdr82	chr9:106083354(+) A-I      intronic chr9:106083826(+) A-I      intronic chr9:106083759(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Wdr82	chr9:106181023(+) A-I intron -    22524474 chr9:106181428(+) A-I intron -    22524474 chr9:106181495(+) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Wdr82	chr9:106170956-106170957(+) m6A 5'UTR//exon       25683224//25412662//24981863 chr9:106171276-106171277(+) m6A CDS//exon       24981863//22608085 chr9:106171282-106171283(+) m6A CDS//exon       24981863//22608085 chr9:106171597-106171598(+) m6A exon//intron       25456834//24981863 chr9:106171699-106171700(+) m6A exon//intron       25683224//25456834//25412662//24981863//25569111 chr9:106171955-106171956(+) m6A exon//intron       25456834//24981863 chr9:106171969-106171970(+) m6A exon//intron       25456834//24981863 chr9:106171984-106171985(+) m6A exon//intron       25456834//24981863 chr9:106171994-106171995(+) m6A exon//intron       25456834//24981863 chr9:106172037-106172038(+) m6A exon//intron       25456834//24981863 chr9:106172056-106172057(+) m6A exon//intron       25456834//24981863 chr9:106172090-106172091(+) m6A exon//intron       25456834 chr9:106172147-106172148(+) m6A exon//intron       25456834 chr9:106172161-106172162(+) m6A exon//intron       25456834 chr9:106172177-106172178(+) m6A exon//intron       25456834 chr9:106172190-106172191(+) m6A exon//intron       25456834//25569111 chr9:106172201-106172202(+) m6A exon//intron       25456834//25569111 chr9:106172208-106172209(+) m6A exon//intron       25456834//25569111 chr9:106180620-106180621(+) m6A CDS       22608085 chr9:106183676-106183677(+) m6A CDS//intron       22608085 chr9:106184202-106184203(+) m6A CDS       25569111//22608085 chr9:106184268-106184269(+) m6A 3'UTR//CDS       25569111//22608085 chr9:106184684-106184685(+) m6A 3'UTR//CDS       22608085 chr9:106184718-106184719(+) m6A 3'UTR//CDS       25569111//22608085 chr9:106184730-106184731(+) m6A 3'UTR//CDS       25569111//22608085 chr9:106184735-106184736(+) m6A 3'UTR//CDS       25569111//22608085 chr9:106185297-106185298(+) m6A 3'UTR//CDS       25569111//22608085 chr9:106186439-106186440(+) m6A 3'UTR//CDS       25569111//22608085 chr9:106188730-106188731(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr9:106188808-106188809(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr9:106188824-106188825(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr9:106188885-106188886(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr9:106188916-106188917(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr9:106189139-106189140(+) m6A 3'UTR       25569111//22608085 chr9:106189186-106189187(+) m6A 3'UTR       25569111//22608085 chr9:106189200-106189201(+) m6A 3'UTR       25456834//25569111//22608085 chr9:106189586-106189587(+) m6A 3'UTR       25569111//22608085 chr9:106190304-106190305(+) m6A 3'UTR       24981863//22608085 chr9:106190355-106190356(+) m6A 3'UTR       24981863//22608085 chr9:106190432-106190433(+) m6A 3'UTR       25683224//24981863//25569111//26404942 chr9:106190463-106190464(+) m6A 3'UTR       25683224//24981863//25569111//26404942//22608085 chr9:106190499-106190500(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr9:106190541-106190542(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr9:106190593-106190594(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr9:106190608-106190609(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr9:106190652-106190653(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr9:106190693-106190694(+) m6A 3'UTR       24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: Wdr82

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar