Basic Information:

  VIRBase ID:  

VHID00616743

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          Pus10:  NM_028956     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	Pus10
miRBase Accession/Entrez ID	MIMAT0005552	74467
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2810013G11Rik//4933435A13Rik//AU014648//C77560//Ccdc139

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Pus10	chr11:23666011-23666012(+) m6A 5'UTR//intron       25569111 chr11:23666256-23666257(+) m6A 5'UTR//exon//intron       - chr11:23711215-23711216(+) m6A CDS       22608085 chr11:23711226-23711227(+) m6A CDS       22608085 chr11:23712234-23712235(+) m6A CDS       22608085 chr11:23720143-23720144(+) m6A CDS//exon       22608085 chr11:23720149-23720150(+) m6A CDS//exon       22608085 chr11:23729000-23729001(+) m6A CDS//exon       25569111 chr11:23729011-23729012(+) m6A CDS//exon       25569111 chr11:23729016-23729017(+) m6A CDS//exon       25569111 chr11:23729021-23729022(+) m6A CDS//exon       25569111 chr11:23729051-23729052(+) m6A CDS//exon       25569111 chr11:23731372-23731373(+) m6A 3'UTR//exon       24981863//25569111 chr11:23731401-23731402(+) m6A 3'UTR       24981863//25569111 chr11:23731460-23731461(+) m6A 3'UTR       24981863//25569111 chr11:23732803-23732804(+) Y 3'UTR//exon       26075521

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Pus10	Nucleus Neuroblastoma cell line (N2A)     22406755 Nucleus Neuroblastoma cell line (N2A)     22406755 Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: Pus10

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar