Basic Information:

  VIRBase ID:  

VHID00616715

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          Actr3:  NM_001205386     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	Actr3
miRBase Accession/Entrez ID	MIMAT0005552	74117
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	1200003A09Rik//A//Arp3

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Actr3	chr1:125393315-125393316(-) m6A 3'UTR       24981863//25569111 chr1:125393353-125393354(-) m6A 3'UTR       24981863//25569111 chr1:125393361-125393362(-) m6A 3'UTR       24981863//25569111 chr1:125393366-125393367(-) m6A 3'UTR       24981863//25569111 chr1:125393532-125393533(-) m6A 3'UTR//exon       24981863//25569111 chr1:125393578-125393579(-) m6A 3'UTR//exon       24981863//25569111 chr1:125393597-125393598(-) m6A 3'UTR//exon       24981863 chr1:125393646-125393647(-) Y 3'UTR//exon       26075521 chr1:125416304-125416305(-) m6A CDS//exon//intron       22608085 chr1:125418294-125418295(-) m6A 5'UTR//CDS//exon//intron       24981863//22608085 chr1:125434610-125434611(-) m6A 5'UTR//intron       24981863//25569111//22608085 chr1:125435296-125435297(-) m6A 5'UTR//CDS//exon       25412662//24981863//25456834//25569111 chr1:125435542-125435543(-) m6A 5'UTR//intron       25412662//24981863//25456834//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Actr3	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: Actr3

Evidence Support:

Prediction-Evidence	Rep
Support Database	RepTar