Basic Information:

  VIRBase ID:  

VHID00616677

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          Fam76b:  NM_176836     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	Fam76b
miRBase Accession/Entrez ID	MIMAT0005552	72826
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2810485I05Rik//C78303

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Fam76b	chr9:13644595(+) A-I      intronic chr9:13644581(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Fam76b	chr9:13840137(+) A-I intron -    22524474 chr9:13840151(+) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Fam76b	chr9:13827729-13827730(+) m6A 5'UTR       25412662//24981863//25569111 chr9:13827866-13827867(+) m6A 5'UTR//exon       25412662//24981863//25569111 chr9:13827883-13827884(+) m6A 5'UTR//exon       25412662//24981863//25569111 chr9:13829776-13829777(+) m6A CDS//exon       22608085 chr9:13831077-13831078(+) m6A CDS//exon       22608085 chr9:13831094-13831095(+) m6A CDS//exon       22608085 chr9:13833039-13833040(+) m6A CDS       24981863//22608085 chr9:13833101-13833102(+) m6A CDS       24981863 chr9:13833117-13833118(+) m6A CDS       24981863 chr9:13835917-13835918(+) m6A CDS       24981863 chr9:13835926-13835927(+) m6A CDS       24981863 chr9:13836133-13836134(+) m6A CDS       24981863 chr9:13836943-13836944(+) m6A 3'UTR//CDS//exon       22608085 chr9:13836948-13836949(+) m6A 3'UTR//CDS//exon       22608085 chr9:13839647-13839648(+) m6A 3'UTR//CDS//exon       22608085 chr9:13839658-13839659(+) m6A 3'UTR//CDS//exon       22608085 chr9:13839687-13839688(+) m6A 3'UTR//CDS//exon       22608085 chr9:13839697-13839698(+) m6A 3'UTR//CDS//exon       22608085 chr9:13839723-13839724(+) m6A 3'UTR//CDS//exon       - chr9:13839731-13839732(+) m6A 3'UTR//CDS//exon       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Fam76b	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: Fam76b

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar