Basic Information:

  VIRBase ID:  

VHID00616618

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          Clmp:  NM_133733     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	Clmp
miRBase Accession/Entrez ID	MIMAT0005552	71566
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	9030425E11Rik//ACAM//ASP5//AW557819

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Clmp	chr9:40686036-40686037(+) m6A 5'UTR//exon       25412662//24981863//25569111 chr9:40686180-40686181(+) m6A 5'UTR//exon       25412662//24981863//25569111 chr9:40760926-40760927(+) m6A CDS//exon       25412662 chr9:40761005-40761006(+) m6A CDS//exon       25412662//24981863 chr9:40761014-40761015(+) m6A CDS//exon       25412662//24981863 chr9:40761047-40761048(+) m6A CDS//exon       25412662//24981863 chr9:40761180-40761181(+) m6A exon//intron       25569111 chr9:40781217-40781218(+) m6A CDS//exon       25412662//24981863//25569111 chr9:40781235-40781236(+) m6A CDS//exon       25412662//24981863//25569111 chr9:40782410-40782411(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr9:40782498-40782499(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:40782519-40782520(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:40782559-40782560(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:40782601-40782602(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:40782620-40782621(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr9:40782740-40782741(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr9:40782779-40782780(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr9:40782838-40782839(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr9:40782913-40782914(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr9:40783032-40783033(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085 chr9:40783082-40783083(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085 chr9:40783128-40783129(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr9:40783209-40783210(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr9:40783222-40783223(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr9:40783268-40783269(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr9:40783310-40783311(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr9:40783427-40783428(+) m6A 3'UTR       25456834//25412662//24981863//25569111//22608085 chr9:40783455-40783456(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr9:40783496-40783497(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr9:40783572-40783573(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr9:40783595-40783596(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr9:40783622-40783623(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr9:40783646-40783647(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr9:40783666-40783667(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr9:40783706-40783707(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr9:40783762-40783763(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//26404942//22608085 chr9:40783768-40783769(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//26404942//22608085 chr9:40783838-40783839(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085 chr9:40783848-40783849(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085 chr9:40783863-40783864(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085 chr9:40783893-40783894(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085 chr9:40784005-40784006(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085 chr9:40784082-40784083(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr9:40784142-40784143(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr9:40784164-40784165(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr9:40784286-40784287(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr9:40784527-40784528(+) m6A 3'UTR       24981863//25569111//26404942 chr9:40784538-40784539(+) m6A 3'UTR       24981863//25569111//26404942 chr9:40784567-40784568(+) m6A 3'UTR       24981863//25569111//26404942 chr9:40784894-40784895(+) m6A 3'UTR       24981863//26404942 chr9:40784928-40784929(+) m6A 3'UTR       24981863//26404942 chr9:40784945-40784946(+) m6A 3'UTR       24981863//25569111//26404942 chr9:40784956-40784957(+) m6A 3'UTR       24981863//25569111//26404942 chr9:40784965-40784966(+) m6A 3'UTR       24981863//25569111//26404942 chr9:40785059-40785060(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942 chr9:40785105-40785106(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942 chr9:40785128-40785129(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942 chr9:40785156-40785157(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr9:40785175-40785176(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr9:40785181-40785182(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr9:40785189-40785190(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr9:40785200-40785201(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr9:40785314-40785315(+) m6A 3'UTR       24981863//25456834

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: Clmp

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar