Basic Information:

  VIRBase ID:  

VHID00616549

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          Arap1:  NM_001040112     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	Arap1
miRBase Accession/Entrez ID	MIMAT0005552	69710
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2410002L19Rik//Centd//Centd2//mKIAA0782

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Arap1	chr7:101348109-101348110(+) m6A 5'UTR       25412662//25569111 chr7:101348157-101348158(+) m6A 5'UTR       25412662//25569111 chr7:101348195-101348196(+) m6A 5'UTR       25412662//25569111 chr7:101361293-101361294(+) m6A 5'UTR//intron       25412662 chr7:101361305-101361306(+) m6A 5'UTR//intron       25412662 chr7:101362061-101362062(+) m6A 5'UTR//intron       24981863 chr7:101362095-101362096(+) m6A 5'UTR//intron       24981863 chr7:101373084-101373085(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:101373134-101373135(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:101373435-101373436(+) m6A CDS       25683224//25412662//24981863 chr7:101373447-101373448(+) m6A CDS       25683224//25412662//24981863//25456834 chr7:101373475-101373476(+) m6A CDS       25683224//25412662//24981863//25456834 chr7:101373480-101373481(+) m6A CDS       25683224//25412662//24981863//25456834 chr7:101378199-101378200(+) m6A 5'UTR//intron       25683224//25412662//24981863//25456834 chr7:101378315-101378316(+) m6A 5'UTR//intron       24981863 chr7:101378338-101378339(+) m6A 5'UTR//intron       24981863 chr7:101378367-101378368(+) m6A 5'UTR//intron       24981863 chr7:101378378-101378379(+) m6A 5'UTR//intron       24981863 chr7:101378411-101378412(+) m6A 5'UTR//intron       24981863 chr7:101378440-101378441(+) m6A 5'UTR//intron       24981863 chr7:101378451-101378452(+) m6A 5'UTR//intron       24981863 chr7:101378508-101378509(+) m6A 5'UTR//intron       24981863 chr7:101384059-101384060(+) m6A 5'UTR//intron       24981863 chr7:101384928-101384929(+) m6A 5'UTR//CDS//exon//intron       25683224//25412662//24981863 chr7:101385412-101385413(+) m6A 5'UTR//intron       25412662//24981863 chr7:101394458-101394459(+) m6A 5'UTR//intron       25412662//25569111 chr7:101399660-101399661(+) m6A CDS       25683224//25412662 chr7:101399994-101399995(+) m6A CDS       25683224//25412662 chr7:101400003-101400004(+) m6A CDS       25683224//25412662 chr7:101400159-101400160(+) m6A CDS       25683224//25412662 chr7:101400210-101400211(+) m6A CDS       25683224//25412662 chr7:101400223-101400224(+) m6A CDS       25683224//25412662 chr7:101400237-101400238(+) m6A CDS       25412662 chr7:101400243-101400244(+) m6A CDS       25412662 chr7:101401412-101401413(+) m6A CDS       25683224//25412662 chr7:101401421-101401422(+) m6A CDS       25683224//25412662 chr7:101401465-101401466(+) m6A CDS       25683224//25412662 chr7:101401478-101401479(+) m6A CDS       25683224//25412662 chr7:101401505-101401506(+) m6A CDS       25683224//25412662 chr7:101401703-101401704(+) m6A CDS       25683224//25412662 chr7:101401842-101401843(+) m6A CDS//exon       25683224//25412662 chr7:101401847-101401848(+) m6A CDS//exon       25683224//25412662 chr7:101402104-101402105(+) m6A CDS//exon       25683224//25412662 chr7:101402134-101402135(+) m6A CDS//exon       25683224//25412662 chr7:101402142-101402143(+) m6A CDS//exon       25683224//25412662 chr7:101411346-101411347(+) m6A 3'UTR//exon       25412662 chr7:101411421-101411422(+) m6A 3'UTR//exon       25412662//25569111 chr7:101411519-101411520(+) m6A 3'UTR//exon       25683224//25412662//24981863 chr7:101411610-101411611(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr7:101411769-101411770(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr7:101411777-101411778(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr7:101412264-101412265(+) m6A 3'UTR       24981863 chr7:101412389-101412390(+) m6A 3'UTR       24981863 chr7:101412400-101412401(+) m6A 3'UTR       24981863

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: Arap1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar