Basic Information:

  VIRBase ID:  

VHID00616212

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          Hdac7:  NM_001204279     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	Hdac7
miRBase Accession/Entrez ID	MIMAT0005552	56233
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	5830434K02Rik//HD7//HD7a//Hdac//Hdac7a//mFLJ00062

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Hdac7	chr15:97793057-97793058(-) m6A 3'UTR//exon       25569111 chr15:97793102-97793103(-) m6A 3'UTR//exon       25569111 chr15:97793128-97793129(-) m6A 3'UTR//exon       25569111 chr15:97793396-97793397(-) m6A 3'UTR//exon       25412662//24981863//25569111 chr15:97793411-97793412(-) m6A 3'UTR//exon       25412662//24981863//25569111 chr15:97793469-97793470(-) m6A 3'UTR//exon       25456834//25412662//24981863//25569111 chr15:97793520-97793521(-) m6A 3'UTR//exon       25456834//25412662//24981863//25569111 chr15:97793530-97793531(-) m6A 3'UTR//exon       25456834//25412662//24981863//25569111 chr15:97793551-97793552(-) m6A 3'UTR//exon       25456834//25412662//24981863//25569111 chr15:97793561-97793562(-) m6A 3'UTR//exon       25456834//25412662//24981863//25569111 chr15:97793686-97793687(-) m6A 3'UTR//exon       25412662 chr15:97793703-97793704(-) m6A CDS//exon       25412662 chr15:97793711-97793712(-) m6A CDS//exon       25412662 chr15:97793932-97793933(-) m6A CDS//exon       25412662 chr15:97794022-97794023(-) m6A CDS//exon       25412662 chr15:97799786-97799787(-) m6A CDS//intron       25412662 chr15:97806477-97806478(-) m6A CDS       25412662 chr15:97806501-97806502(-) m6A CDS       25412662 chr15:97806558-97806559(-) m6A CDS       25412662 chr15:97806577-97806578(-) m6A CDS       25412662 chr15:97806608-97806609(-) m6A CDS       25412662 chr15:97807659-97807660(-) m6A CDS//intron       25412662//24981863 chr15:97807683-97807684(-) m6A CDS//intron       25412662//24981863 chr15:97807703-97807704(-) m6A CDS//intron       25412662 chr15:97807711-97807712(-) m6A CDS//intron       25412662 chr15:97807985-97807986(-) m6A CDS       25683224//25412662//24981863 chr15:97808065-97808066(-) m6A CDS       25683224//25412662 chr15:97808355-97808356(-) m6A CDS       25412662 chr15:97808384-97808385(-) m6A CDS       25412662 chr15:97809409-97809410(-) m6A CDS       25412662 chr15:97809494-97809495(-) m6A CDS       25412662 chr15:97809518-97809519(-) m6A CDS       25412662 chr15:97809926-97809927(-) m6A CDS       25412662 chr15:97809945-97809946(-) m6A CDS       25412662 chr15:97809954-97809955(-) m6A CDS       25412662 chr15:97810021-97810022(-) m6A CDS//intron       25412662 chr15:97810886-97810887(-) m6A CDS       25412662 chr15:97810908-97810909(-) m6A CDS       25412662//24981863 chr15:97811276-97811277(-) m6A CDS       25412662//24981863//25569111 chr15:97811299-97811300(-) m6A CDS       25412662//24981863//25569111 chr15:97811314-97811315(-) m6A CDS       25412662//24981863//25569111 chr15:97811342-97811343(-) m6A CDS       25412662//24981863//25569111 chr15:97811576-97811577(-) m6A CDS       25412662//25569111 chr15:97811606-97811607(-) m6A 5'UTR//CDS       25412662//25569111 chr15:97814713-97814714(-) m6A 5'UTR//intron       25412662//25569111 chr15:97814744-97814745(-) m6A 5'UTR//intron       25412662//25569111 chr15:97826739-97826740(-) m6A 5'UTR//intron       25412662//25569111 chr15:97826760-97826761(-) m6A 5'UTR//intron       25412662//25569111 chr15:97831574-97831575(-) m6A 5'UTR//intron       25412662//24981863

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: Hdac7

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar