Basic Information:

  VIRBase ID:  

VHID00616113

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          Ttpa:  NM_015767     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	Ttpa
miRBase Accession/Entrez ID	MIMAT0005552	50500
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	alph//alpha-TTP

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ttpa	chr4:20028521-20028522(+) m6A CDS       25683224//26404942 chr4:20028569-20028570(+) m6A 3'UTR//CDS       25683224//26404942 chr4:20028644-20028645(+) m6A 3'UTR       25683224//25456834//26404942//22575960 chr4:20028656-20028657(+) m6A 3'UTR       25683224//25456834//26404942//22575960 chr4:20028665-20028666(+) m6A 3'UTR       25683224//25456834//26404942//22575960 chr4:20028692-20028693(+) m6A 3'UTR       25683224//25456834//26404942//22575960 chr4:20028787-20028788(+) m6A 3'UTR       25683224//25456834//25569111//26404942 chr4:20028800-20028801(+) m6A 3'UTR       25683224//25456834//25569111//26404942 chr4:20028865-20028866(+) m6A 3'UTR       25683224//25569111//26404942 chr4:20028950-20028951(+) m6A 3'UTR       25683224//26404942 chr4:20028995-20028996(+) m6A 3'UTR       25683224//26404942 chr4:20029023-20029024(+) m6A 3'UTR       25683224//26404942 chr4:20029294-20029295(+) m6A 3'UTR       26404942 chr4:20029343-20029344(+) m6A 3'UTR       26404942 chr4:20029550-20029551(+) m6A 3'UTR       26404942 chr4:20029654-20029655(+) m6A 3'UTR       26404942 chr4:20029664-20029665(+) m6A 3'UTR       26404942 chr4:20029677-20029678(+) m6A 3'UTR       26404942 chr4:20030027-20030028(+) m6A 3'UTR       26404942 chr4:20030038-20030039(+) m6A 3'UTR       26404942 chr4:20030075-20030076(+) m6A 3'UTR       26404942//22608085 chr4:20030283-20030284(+) m6A 3'UTR       26404942 chr4:20030304-20030305(+) m6A 3'UTR       26404942 chr4:20030335-20030336(+) m6A 3'UTR       26404942

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: Ttpa

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar