Basic Information:

  VIRBase ID:  

VHID00616073

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          Ppp2r5c:  NR_164198     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	Ppp2r5c
miRBase Accession/Entrez ID	MIMAT0005552	26931
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2610043M05Rik//2700063L20Rik//AI060890//AW545884//C85228//D12Bwg0916e

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ppp2r5c	chr12:110554876-110554877(+) m6A CDS       22608085 chr12:110554892-110554893(+) m6A CDS       22608085 chr12:110561330-110561331(+) m6A CDS       22608085 chr12:110567841-110567842(+) m6A CDS       24981863//22608085 chr12:110567851-110567852(+) m6A CDS       24981863//22608085 chr12:110568986-110568987(+) m6A CDS       24981863//22608085 chr12:110569003-110569004(+) m6A CDS       24981863//22608085 chr12:110569010-110569011(+) m6A CDS       24981863//22608085 chr12:110569049-110569050(+) m6A CDS       24981863//22608085 chr12:110574795-110574796(+) m6A CDS//intron       24981863 chr12:110574837-110574838(+) m6A CDS//intron       25412662//24981863 chr12:110580461-110580462(+) m6A CDS       25683224//25412662//24981863 chr12:110580591-110580592(+) m6A 3'UTR       25683224//24981863 chr12:110581137-110581138(+) Y 3'UTR//exon       26075521 chr12:110581389-110581390(+) m6A 3'UTR       24981863//25569111 chr12:110581840-110581841(+) m6A 3'UTR       25412662//22608085 chr12:110581891-110581892(+) m6A 3'UTR       25412662//22608085 chr12:110581999-110582000(+) m6A 3'UTR       25412662//24981863//22608085 chr12:110582022-110582023(+) m6A 3'UTR       24981863//25412662//22608085 chr12:110582036-110582037(+) m6A 3'UTR       24981863//25412662//22608085 chr12:110582178-110582179(+) m6A 3'UTR       25683224//22608085

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: Ppp2r5c

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar