Basic Information:

  VIRBase ID:  

VHID00615848

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          Rbbp6:  NM_175023     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	Rbbp6
miRBase Accession/Entrez ID	MIMAT0005552	19647
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	4933422O15Rik//AI316869//BB233631//C030034J04Rik//C77662//P2P-R//PACT

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Rbbp6	chr7:122969429-122969430(+) m6A 5'UTR       25456834//24981863//25569111//22608085//22575960 chr7:122969450-122969451(+) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:122970576-122970577(+) m6A 5'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:122970602-122970603(+) m6A 5'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:122970616-122970617(+) m6A 5'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:122970681-122970682(+) m6A 5'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:122970798-122970799(+) m6A 5'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr7:122970939-122970940(+) m6A 5'UTR//intron       22608085 chr7:122970993-122970994(+) m6A CDS       22608085 chr7:122975653-122975654(+) m6A exon//intron       22608085 chr7:122979267-122979268(+) m6A 3'UTR//intron       24981863//22608085 chr7:122982442-122982443(+) m6A 3'UTR//intron       25683224 chr7:122982466-122982467(+) m6A 3'UTR//intron       25683224 chr7:122982474-122982475(+) m6A 3'UTR//intron       25683224 chr7:122982487-122982488(+) m6A 3'UTR//intron       25683224 chr7:122982519-122982520(+) m6A 3'UTR//intron       25683224 chr7:122983190-122983191(+) m6A 3'UTR//exon//intron       25456834//24981863 chr7:122983199-122983200(+) m6A 3'UTR//exon//intron       25456834//24981863 chr7:122983255-122983256(+) m6A 3'UTR//exon//intron       25683224//25456834//24981863 chr7:122983264-122983265(+) m6A 3'UTR//exon//intron       25683224//25456834//24981863 chr7:122983314-122983315(+) m6A 3'UTR//exon//intron       25683224//25456834//24981863//25569111 chr7:122983335-122983336(+) m6A 3'UTR//exon//intron       25683224//25456834//24981863//25569111 chr7:122983357-122983358(+) m6A 3'UTR//exon//intron       25456834//25569111 chr7:122990068-122990069(+) m6A CDS       24981863 chr7:122990094-122990095(+) m6A CDS       24981863 chr7:122990133-122990134(+) m6A CDS//exon       24981863 chr7:122990150-122990151(+) m6A CDS//exon       24981863 chr7:122990184-122990185(+) m6A CDS//exon       24981863 chr7:122996950-122996951(+) m6A CDS       24981863//25569111 chr7:122996985-122996986(+) m6A CDS       24981863//25569111 chr7:122997216-122997217(+) m6A CDS       24981863 chr7:122998803-122998804(+) m6A CDS       24981863//25569111 chr7:122998840-122998841(+) m6A CDS       24981863//25569111 chr7:122998928-122998929(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr7:122999025-122999026(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr7:122999045-122999046(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr7:122999061-122999062(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr7:122999114-122999115(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr7:122999127-122999128(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr7:122999186-122999187(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:122999261-122999262(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:122999274-122999275(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:122999318-122999319(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:122999380-122999381(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:122999483-122999484(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:122999524-122999525(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:122999564-122999565(+) m6A CDS       25683224//25456834//24981863//25569111 chr7:122999577-122999578(+) m6A CDS       25683224//25456834//24981863//25569111 chr7:122999589-122999590(+) m6A CDS       25683224//25456834//24981863//25569111 chr7:122999612-122999613(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr7:122999688-122999689(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:122999728-122999729(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:122999763-122999764(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:122999807-122999808(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:122999819-122999820(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:122999880-122999881(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:122999983-122999984(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr7:122999997-122999998(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr7:123000046-123000047(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr7:123000059-123000060(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr7:123000099-123000100(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr7:123000112-123000113(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr7:123000159-123000160(+) m6A CDS       25683224//24981863//25456834//25569111 chr7:123000198-123000199(+) m6A CDS       25683224//24981863//25456834//25569111 chr7:123000629-123000630(+) m6A 3'UTR//CDS       24981863//25456834//25569111 chr7:123000644-123000645(+) m6A 3'UTR//CDS       24981863//25456834//25569111 chr7:123000656-123000657(+) m6A 3'UTR//CDS       24981863//25456834//25569111 chr7:123000776-123000777(+) m6A 3'UTR//CDS       24981863//25569111 chr7:123000805-123000806(+) m6A 3'UTR//CDS       25683224//24981863//25569111 chr7:123000889-123000890(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111 chr7:123000987-123000988(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:123001014-123001015(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:123001050-123001051(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:123001068-123001069(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:123001087-123001088(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:123001097-123001098(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:123001121-123001122(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:123001127-123001128(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:123001170-123001171(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:123001188-123001189(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:123001200-123001201(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:123001269-123001270(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:123001386-123001387(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:123001421-123001422(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:123001442-123001443(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:123001461-123001462(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:123001528-123001529(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:123001554-123001555(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:123001615-123001616(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:123001684-123001685(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:123001761-123001762(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:123001775-123001776(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:123001833-123001834(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:123001901-123001902(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:123001944-123001945(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:123002056-123002057(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:123002062-123002063(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:123002072-123002073(+) m1A 3'UTR//CDS       26863196 chr7:123002088-123002089(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:123002094-123002095(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:123002240-123002241(+) m6A 3'UTR       25456834//24981863//25569111 chr7:123002308-123002309(+) m6A 3'UTR       25456834//24981863//25569111 chr7:123002342-123002343(+) m6A 3'UTR       25456834//24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: Rbbp6

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar