Basic Information:

  VIRBase ID:  

VHID00615708

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          Mpv17:  NM_008622     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	Mpv17
miRBase Accession/Entrez ID	MIMAT0005552	17527
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	Tg.Mpv//Tg.Mpv17

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Mpv17	chr5:31445741(-) A-I      intronic chr5:31445748(-) A-I      intronic chr5:31451067(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Mpv17	chr5:31143368(-) A-I intron -    22524474 chr5:31143375(-) A-I intron -    22524474 chr5:31148694(-) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Mpv17	chr5:31141338-31141339(-) m6A 3'UTR       24981863//25569111//22608085 chr5:31141381-31141382(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr5:31141511-31141512(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr5:31141533-31141534(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr5:31141639-31141640(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr5:31141691-31141692(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr5:31141706-31141707(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr5:31141719-31141720(-) m6A 3'UTR//exon       25456834//24981863//25569111//22608085 chr5:31141814-31141815(-) m6A CDS//exon       25456834//24981863//25569111 chr5:31144084-31144085(-) m6A exon//intron       24981863//25569111 chr5:31144378-31144379(-) m6A 3'UTR//exon//intron       25456834 chr5:31144418-31144419(-) m6A 3'UTR//exon//intron       25456834 chr5:31151161-31151162(-) m6A intron       25412662//24981863//25569111 chr5:31151182-31151183(-) m6A intron       25412662//25569111 chr5:31151192-31151193(-) m6A intron       25412662//25569111 chr5:31151266-31151267(-) m6A intron       25412662 chr5:31151623-31151624(-) m6A intron       24981863//25569111 chr5:31154162-31154163(-) m6A 5'UTR//intron       25412662//24981863 chr5:31154238-31154239(-) m6A 5'UTR       24981863//25569111//22575960 chr5:31156918-31156919(-) Y intron       26075521

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: Mpv17

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar