Basic Information:

  VIRBase ID:  

VHID00615641

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          Itga4:  NM_010576     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	Itga4
miRBase Accession/Entrez ID	MIMAT0005552	16401
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	CD49D//Itga4B

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Itga4	chr2:79325654-79325655(+) m6A CDS       24981863 chr2:79326536-79326537(+) m6A CDS       24981863 chr2:79326565-79326566(+) m6A CDS       24981863//22608085 chr2:79326574-79326575(+) m6A CDS       24981863//22608085 chr2:79326617-79326618(+) m6A 3'UTR       24981863//22608085 chr2:79326634-79326635(+) m6A 3'UTR       24981863//22608085 chr2:79326642-79326643(+) m6A 3'UTR       24981863//22608085 chr2:79326676-79326677(+) m6A 3'UTR       24981863//22608085 chr2:79326805-79326806(+) m6A 3'UTR       24981863//22608085 chr2:79326847-79326848(+) m6A 3'UTR       24981863//22608085 chr2:79326873-79326874(+) m6A 3'UTR       24981863//22608085 chr2:79326961-79326962(+) m6A 3'UTR       24981863//22608085 chr2:79326997-79326998(+) m6A 3'UTR       24981863//22608085 chr2:79327027-79327028(+) m6A 3'UTR       24981863 chr2:79327226-79327227(+) m6A 3'UTR       24981863 chr2:79327237-79327238(+) m6A 3'UTR       24981863 chr2:79327338-79327339(+) m6A 3'UTR       24981863//22608085 chr2:79327350-79327351(+) m6A 3'UTR       24981863//22608085 chr2:79327379-79327380(+) m6A 3'UTR       24981863//22608085 chr2:79327384-79327385(+) m6A 3'UTR       24981863//22608085 chr2:79327401-79327402(+) m6A 3'UTR       24981863//22608085 chr2:79327453-79327454(+) m6A 3'UTR       24981863//22608085 chr2:79327461-79327462(+) m6A 3'UTR       24981863//22608085 chr2:79327526-79327527(+) m6A 3'UTR       24981863//22608085 chr2:79327544-79327545(+) m6A 3'UTR       24981863//22608085 chr2:79327594-79327595(+) m6A 3'UTR       24981863//22608085 chr2:79327660-79327661(+) m6A 3'UTR       24981863 chr2:79327779-79327780(+) m6A 3'UTR       24981863 chr2:79327826-79327827(+) m6A 3'UTR       24981863 chr2:79327842-79327843(+) m6A 3'UTR       24981863 chr2:79327867-79327868(+) m6A 3'UTR       24981863 chr2:79327923-79327924(+) m6A 3'UTR       24981863 chr2:79327929-79327930(+) m6A 3'UTR       24981863 chr2:79327937-79327938(+) m6A 3'UTR       24981863 chr2:79327964-79327965(+) m6A 3'UTR       24981863 chr2:79327984-79327985(+) m6A 3'UTR       24981863 chr2:79328060-79328061(+) m6A 3'UTR       24981863 chr2:79330511-79330512(+) m6A 3'UTR       22608085 chr2:79330678-79330679(+) m6A 3'UTR       25456834 chr2:79332228-79332229(+) m6A 3'UTR       25683224

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Itga4	Exosome Mast cells     17486113

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: Itga4

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar