Basic Information:

  VIRBase ID:  

VHID00615590

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          Hcn1:  NM_010408     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	Hcn1
miRBase Accession/Entrez ID	MIMAT0005552	15165
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	Bcng//Bcng1//C630013B14Rik//HAC//HAC2

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Hcn1	chr13:117602720-117602721(+) m6A CDS//exon       25569111 chr13:117603054-117603055(+) m6A CDS//exon       22608085 chr13:117656745-117656746(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr13:117656765-117656766(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr13:117656771-117656772(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr13:117656784-117656785(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr13:117656805-117656806(+) m6A CDS//exon       25456834//24981863//25569111//22608085 chr13:117656853-117656854(+) m6A CDS//exon       25456834//24981863//25569111//22608085 chr13:117656910-117656911(+) m6A CDS//exon       24981863//25569111//22608085 chr13:117656927-117656928(+) m6A CDS//exon       24981863//25569111//22608085 chr13:117975451-117975452(+) m6A CDS       24981863//25569111//22608085 chr13:117975613-117975614(+) m6A CDS       24981863//25569111//22608085 chr13:117975700-117975701(+) m6A CDS       24981863//25569111//22608085 chr13:117975706-117975707(+) m6A CDS       24981863//25569111//22608085 chr13:117975712-117975713(+) m6A CDS       24981863//25569111//22608085 chr13:117975832-117975833(+) m6A CDS       24981863//25569111//22608085 chr13:117975972-117975973(+) m6A CDS       24981863//25569111//22608085 chr13:117976193-117976194(+) m6A CDS       25456834//24981863//25569111//22608085 chr13:117976209-117976210(+) m6A CDS       25456834//24981863//25569111//22608085 chr13:117976275-117976276(+) m6A 3'UTR       25456834//24981863//22608085 chr13:117976381-117976382(+) m6A 3'UTR       24981863//22608085 chr13:117976911-117976912(+) m6A 3'UTR       24981863//22608085 chr13:117979426-117979427(+) m6A 3'UTR       24981863//22608085 chr13:117979436-117979437(+) m6A 3'UTR       24981863//22608085 chr13:117979452-117979453(+) m6A 3'UTR       24981863//22608085 chr13:117979500-117979501(+) m6A 3'UTR       24981863//22608085 chr13:117979509-117979510(+) m6A 3'UTR       24981863//22608085 chr13:117980679-117980680(+) m6A 3'UTR       24981863//22608085 chr13:117980684-117980685(+) m6A 3'UTR       24981863//22608085 chr13:117980758-117980759(+) m6A 3'UTR       24981863//22608085 chr13:117980780-117980781(+) m6A 3'UTR       24981863//22608085 chr13:117980873-117980874(+) m6A 3'UTR       24981863//22608085 chr13:117980882-117980883(+) m6A 3'UTR       24981863//22608085 chr13:117980908-117980909(+) m6A 3'UTR       24981863//22608085 chr13:117980931-117980932(+) m6A 3'UTR       24981863//22608085 chr13:117981048-117981049(+) m6A 3'UTR       24981863//22608085 chr13:117981070-117981071(+) m6A 3'UTR       24981863//22608085 chr13:117986627-117986628(+) m6A 3'UTR       22608085 chr13:117986690-117986691(+) m6A 3'UTR       22608085

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: Hcn1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar