Basic Information:

  VIRBase ID:  

VHID00614824

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M87-1:  MIMAT0005550          Plcl2:  NM_013880     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M87-1	Plcl2
miRBase Accession/Entrez ID	MIMAT0005550	224860
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	mKIAA1092//Plc//PLC-L2//Plce2//PR//PRIP-2

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Plcl2	chr17:50509782-50509783(+) m6A CDS       25683224//25412662//24981863//25569111 chr17:50509817-50509818(+) m6A CDS       25683224//24981863//25569111 chr17:50509834-50509835(+) m6A CDS       25683224//24981863//25569111 chr17:50509859-50509860(+) m6A CDS       25683224//24981863//25569111 chr17:50509893-50509894(+) m6A CDS       25683224//24981863//25569111//22608085 chr17:50509900-50509901(+) m6A CDS       25683224//24981863//25569111//22608085 chr17:50606410-50606411(+) m6A CDS       25683224//24981863//25456834//25569111//22608085 chr17:50606552-50606553(+) m6A CDS       24981863//25569111//22608085 chr17:50606562-50606563(+) m6A CDS       24981863//22608085 chr17:50606685-50606686(+) m6A CDS       25456834//24981863//25569111//22608085 chr17:50606701-50606702(+) m6A CDS       25456834//24981863//25569111//22608085 chr17:50606728-50606729(+) m6A CDS       25456834//24981863//25569111//22608085 chr17:50606760-50606761(+) m6A CDS       25456834//24981863//25569111//22608085 chr17:50606771-50606772(+) m6A CDS       25456834//24981863//25569111//22608085 chr17:50606821-50606822(+) m6A CDS       25456834//24981863//25569111//26404942//22608085 chr17:50606859-50606860(+) m6A CDS       25456834//24981863//25569111//26404942//22608085 chr17:50606879-50606880(+) m6A CDS       25456834//24981863//25569111//26404942//22608085 chr17:50606925-50606926(+) m6A CDS       24981863//25456834//25569111//26404942//22608085 chr17:50606977-50606978(+) m6A CDS       24981863//25456834//25569111//26404942//22608085 chr17:50606989-50606990(+) m6A CDS       24981863//25456834//26404942//22608085 chr17:50607051-50607052(+) m6A CDS       24981863//25456834//26404942//22608085 chr17:50607076-50607077(+) m6A CDS       24981863//26404942//22608085 chr17:50607226-50607227(+) m6A CDS       24981863//25569111//22608085 chr17:50607279-50607280(+) m6A CDS       24981863//22608085 chr17:50607772-50607773(+) m6A CDS       24981863//25569111 chr17:50607817-50607818(+) m6A CDS       24981863//25569111 chr17:50607945-50607946(+) m6A CDS       25456834//24981863//25569111//22608085 chr17:50607954-50607955(+) m6A CDS       25456834//24981863//25569111//22608085 chr17:50608029-50608030(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr17:50608074-50608075(+) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr17:50608082-50608083(+) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr17:50608101-50608102(+) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr17:50608134-50608135(+) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr17:50608203-50608204(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr17:50608260-50608261(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr17:50608270-50608271(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr17:50608305-50608306(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr17:50608361-50608362(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr17:50608374-50608375(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr17:50608435-50608436(+) m6A CDS       25456834//24981863//25569111//22608085 chr17:50608694-50608695(+) m6A CDS       25683224//24981863//25569111//22608085 chr17:50608709-50608710(+) m6A CDS       25683224//24981863//25569111//22608085 chr17:50608761-50608762(+) m6A CDS       25683224//24981863//25569111//22608085 chr17:50608773-50608774(+) m6A CDS       25683224//24981863//25569111//22608085 chr17:50611112-50611113(+) m6A CDS       24981863 chr17:50611115-50611116(+) Y CDS//exon       26075521 chr17:50668014-50668015(+) m6A CDS       24981863 chr17:50668059-50668060(+) m6A CDS       24981863 chr17:50687747-50687748(+) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr17:50687757-50687758(+) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr17:50687794-50687795(+) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr17:50687799-50687800(+) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr17:50687817-50687818(+) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr17:50687886-50687887(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:50687912-50687913(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:50687926-50687927(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:50688059-50688060(+) m6A 3'UTR       25456834//24981863//22608085//22575960 chr17:50688074-50688075(+) m6A 3'UTR       25456834//24981863//22608085//22575960 chr17:50688091-50688092(+) m6A 3'UTR       25456834//24981863//22608085//22575960 chr17:50688164-50688165(+) m6A 3'UTR       24981863//22608085 chr17:50688189-50688190(+) m6A 3'UTR       24981863//22608085 chr17:50688329-50688330(+) m6A 3'UTR       24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Plcl2	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M87-1
Interactor2: Plcl2

Evidence Support:

Prediction-Evidence	Rep
Support Database	RepTar