Basic Information:

  VIRBase ID:  

VHID00614551

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M87-1:  MIMAT0005550          Sgsm3:  NM_134091     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M87-1	Sgsm3
miRBase Accession/Entrez ID	MIMAT0005550	105835
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	1810012I01Rik//AI428557//BB175482//CIP//Cip85//R75178//RUSC3//Rutbc//Rutbc3

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Sgsm3	chr15:80977861-80977862(+) m6A 5'UTR//exon       24981863//25569111 chr15:81002586-81002587(+) m6A 5'UTR//exon       24981863//25569111 chr15:81002623-81002624(+) m6A 5'UTR//exon       24981863//25569111 chr15:81003362-81003363(+) m6A CDS//exon       25569111 chr15:81003861-81003862(+) m6A 3'UTR//CDS//exon       25683224//25412662//22608085 chr15:81006454-81006455(+) m6A 3'UTR//CDS//exon       25683224//22608085 chr15:81006529-81006530(+) m6A CDS//exon       25683224//22608085 chr15:81006563-81006564(+) m6A CDS//exon       25683224//22608085 chr15:81006745-81006746(+) m6A CDS//exon       25683224//22608085 chr15:81006778-81006779(+) m6A CDS//exon       25683224//22608085 chr15:81006795-81006796(+) m6A CDS//exon       25683224//22608085 chr15:81006809-81006810(+) m6A CDS//exon       25683224//22608085 chr15:81007456-81007457(+) m6A CDS//exon       25683224//22608085 chr15:81007501-81007502(+) m6A CDS//exon       25683224//22608085 chr15:81008738-81008739(+) m6A CDS//exon//intron       25412662//22608085 chr15:81008824-81008825(+) m6A CDS//exon//intron       25412662//22608085 chr15:81008861-81008862(+) m6A CDS//exon//intron       25412662//22608085 chr15:81008872-81008873(+) m6A CDS//exon//intron       25412662//22608085 chr15:81009439-81009440(+) m6A CDS//exon       25683224//22608085 chr15:81009450-81009451(+) m6A CDS//exon       25683224//25412662//22608085 chr15:81009514-81009515(+) m6A CDS//exon       25683224//25412662//22608085 chr15:81009523-81009524(+) m6A CDS//exon       25683224//25412662//22608085 chr15:81009646-81009647(+) m6A CDS//exon       25683224//25412662//22608085 chr15:81009673-81009674(+) m6A CDS//exon       25683224//25412662//22608085 chr15:81009682-81009683(+) m6A CDS//exon       25683224//25412662//22608085 chr15:81009733-81009734(+) m6A CDS//exon       25683224//22608085 chr15:81010062-81010063(+) m6A exon//intron       25569111 chr15:81010187-81010188(+) m6A exon//intron       25569111 chr15:81010452-81010453(+) m6A CDS//exon       25683224//25569111 chr15:81010466-81010467(+) m6A CDS//exon       25683224//25569111 chr15:81010498-81010499(+) m6A CDS//exon       25683224//25569111 chr15:81010741-81010742(+) m6A CDS//exon       25683224//25569111//22608085 chr15:81010779-81010780(+) m6A CDS//exon       25683224//25569111//22608085 chr15:81010934-81010935(+) m6A exon//intron       25569111//22608085 chr15:81011240-81011241(+) m6A CDS//exon       25569111//22608085 chr15:81011496-81011497(+) m6A CDS//exon       25569111//22608085 chr15:81011689-81011690(+) m6A CDS//exon       25569111//22608085 chr15:81011781-81011782(+) m6A 3'UTR//exon       24981863//25569111 chr15:81011863-81011864(+) m6A 3'UTR//exon       24981863//25569111 chr15:81011886-81011887(+) m6A 3'UTR//exon       24981863//25569111 chr15:81012023-81012024(+) m6A 3'UTR//exon       24981863//25569111//22608085 chr15:81012042-81012043(+) m6A 3'UTR//exon       24981863//25569111//22608085 chr15:81012058-81012059(+) m6A 3'UTR//exon       24981863//25569111//22608085

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M87-1
Interactor2: Sgsm3

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar