Basic Information:

  VIRBase ID:  

VHID00614071

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M87-1:  MIMAT0005550          Trim62:  NM_178110     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M87-1	Trim62
miRBase Accession/Entrez ID	MIMAT0005550	67525
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	6330414G21Rik//AI450348//Dea//Dear1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Trim62	chr4:128883614-128883615(+) m6A 5'UTR       25412662//24981863//25569111 chr4:128883961-128883962(+) m6A 5'UTR       25683224//25412662//24981863 chr4:128883969-128883970(+) m6A 5'UTR       25456834//25412662//24981863 chr4:128884040-128884041(+) m6A 5'UTR       25456834//25412662//25569111 chr4:128884227-128884228(+) m6A CDS       25456834//25412662//24981863//25569111 chr4:128884485-128884486(+) m6A CDS       25683224//25412662//24981863//22608085 chr4:128885199-128885200(+) m6A CDS//intron       25683224//25412662 chr4:128885234-128885235(+) m6A 3'UTR//intron       25412662 chr4:128886782-128886783(+) m6A 3'UTR//intron       25683224//25412662 chr4:128896824-128896825(+) m6A 3'UTR//CDS       25683224//25412662 chr4:128896853-128896854(+) m6A 3'UTR//CDS       25683224//25412662 chr4:128896866-128896867(+) m6A 3'UTR//CDS       25683224//25412662 chr4:128896909-128896910(+) m6A 3'UTR//CDS       25683224//25412662 chr4:128900566-128900567(+) m6A 3'UTR//CDS       25683224//25412662 chr4:128900637-128900638(+) m6A 3'UTR//CDS       25683224//25412662//24981863 chr4:128900669-128900670(+) m6A 3'UTR//CDS       25683224//25412662//24981863 chr4:128900755-128900756(+) m6A 3'UTR//CDS       25683224//24981863 chr4:128902494-128902495(+) m6A 3'UTR//CDS       24981863 chr4:128902513-128902514(+) m6A 3'UTR//CDS       24981863 chr4:128902576-128902577(+) m6A 3'UTR//CDS       25683224//24981863 chr4:128902593-128902594(+) m6A 3'UTR//intron       25683224//24981863 chr4:128903561-128903562(+) m6A 3'UTR//intron       25683224//24981863 chr4:128909056-128909057(+) m6A CDS       25683224//24981863 chr4:128909119-128909120(+) m6A CDS       25683224//24981863//25569111 chr4:128909143-128909144(+) m6A CDS       25683224//25412662//24981863//25569111 chr4:128909238-128909239(+) m6A CDS       25683224//25412662//24981863//25569111 chr4:128909370-128909371(+) m6A CDS       25683224//24981863//25569111 chr4:128909419-128909420(+) m6A CDS       25683224//24981863//25456834//25569111 chr4:128909601-128909602(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr4:128909657-128909658(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr4:128909663-128909664(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr4:128909693-128909694(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr4:128909849-128909850(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr4:128910091-128910092(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr4:128910135-128910136(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr4:128910201-128910202(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr4:128910210-128910211(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr4:128910224-128910225(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr4:128910235-128910236(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr4:128910279-128910280(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr4:128910366-128910367(+) m6A 3'UTR       25683224//25456834//24981863//22608085 chr4:128910405-128910406(+) m6A 3'UTR       25683224//25456834//25412662//24981863//22608085 chr4:128910442-128910443(+) m6A 3'UTR       25683224//25456834//25412662//24981863//22608085 chr4:128910471-128910472(+) m6A 3'UTR       25683224//25456834//25412662//24981863//22608085 chr4:128910531-128910532(+) m6A 3'UTR       25683224//25412662//24981863//22608085 chr4:128910556-128910557(+) m6A 3'UTR       25683224//25456834//25412662//24981863//22608085 chr4:128910743-128910744(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr4:128910756-128910757(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr4:128910762-128910763(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr4:128910885-128910886(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr4:128910929-128910930(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr4:128910934-128910935(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr4:128911045-128911046(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr4:128911148-128911149(+) m6A 3'UTR       25683224//25456834//24981863//22608085 chr4:128911237-128911238(+) m6A 3'UTR       24981863

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M87-1
Interactor2: Trim62

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar