Detail Information

Basic Information:


  VIRBase ID:  

VHID00613916

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M87-1:           Lat2:      

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Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-M87-1 Lat2
miRBase
Accession/Entrez ID
MIMAT0005550 56743
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - AW125574//LAB//NTAL//Wbsc//Wbscr//Wbscr15//Wbscr5//WSCR5

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Lat2
chr5:134600745-134600746(-) m6A 3'UTR//exon       24981863//25412662//25569111
chr5:134600768-134600769(-) m6A 3'UTR//exon       24981863//25412662//25569111
chr5:134600806-134600807(-) m6A 3'UTR//exon       24981863//25412662//25569111
chr5:134600850-134600851(-) m6A 3'UTR//exon       24981863//25412662//25569111
chr5:134600941-134600942(-) m6A 3'UTR//exon//intron       24981863
chr5:134602579-134602580(-) m6A 3'UTR//exon       24981863
chr5:134602593-134602594(-) m6A 3'UTR//CDS//exon       24981863
chr5:134602626-134602627(-) m6A 3'UTR//CDS//exon       24981863
chr5:134603104-134603105(-) m6A 3'UTR//CDS//exon       24981863
chr5:134608990-134608991(-) m6A 5'UTR//intron       24981863
chr5:134609006-134609007(-) m6A 5'UTR//intron       24981863

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-M87-1
Interactor2: Lat2

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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