Basic Information:

  VIRBase ID:  

VHID00613674

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M87-1:  MIMAT0005550          Tmpo:  NM_011605     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M87-1	Tmpo
miRBase Accession/Entrez ID	MIMAT0005550	21917
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	5630400D24Rik//AI195756//AI606875//AW214352//AW547477//L//LAP2//T//TP

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Tmpo	chr10:91148858-91148859(-) m6A 3'UTR       24981863//22608085 chr10:91148888-91148889(-) m6A 3'UTR       24981863//22608085 chr10:91149164-91149165(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr10:91149224-91149225(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr10:91149256-91149257(-) m6A 3'UTR       25456834//25412662//24981863//25569111//26404942//22608085 chr10:91149304-91149305(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr10:91149341-91149342(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr10:91149389-91149390(-) Y 3'UTR//exon       26075521 chr10:91149391-91149392(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr10:91149419-91149420(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr10:91149531-91149532(-) m6A CDS       25456834//24981863//25569111//22608085 chr10:91149546-91149547(-) Y CDS//exon       26075521 chr10:91149742-91149743(-) m6A CDS       25412662//22608085 chr10:91151765-91151766(-) m6A CDS       25412662//24981863//22608085 chr10:91151784-91151785(-) m6A CDS       25412662//24981863//22608085 chr10:91152645-91152646(-) m6A CDS//intron       25412662//24981863//22608085 chr10:91152656-91152657(-) m6A CDS//intron       25412662//24981863//22608085 chr10:91152670-91152671(-) m6A CDS//intron       25412662//24981863//22608085 chr10:91153113-91153114(-) m6A CDS//intron       24981863//22608085 chr10:91153173-91153174(-) m6A CDS//intron       24981863//22608085 chr10:91153291-91153292(-) m6A CDS//intron       25412662//24981863//22608085 chr10:91153337-91153338(-) m6A CDS//intron       25412662//24981863//22608085 chr10:91153369-91153370(-) m6A CDS//intron       25412662//24981863 chr10:91158761-91158762(-) m6A CDS       25412662//24981863//22608085 chr10:91162607-91162608(-) m6A CDS//intron       24981863 chr10:91162636-91162637(-) m6A CDS//intron       24981863 chr10:91162696-91162697(-) m6A CDS//intron       24981863 chr10:91162709-91162710(-) m6A CDS//intron       24981863 chr10:91162743-91162744(-) m6A CDS//intron       24981863 chr10:91162958-91162959(-) m6A CDS//intron       24981863 chr10:91162980-91162981(-) m6A CDS//intron       24981863//25569111 chr10:91163166-91163167(-) m6A CDS//intron       25683224//25456834//24981863//25569111 chr10:91163180-91163181(-) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111 chr10:91163193-91163194(-) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111 chr10:91163218-91163219(-) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111 chr10:91163223-91163224(-) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111 chr10:91163302-91163303(-) m6A CDS//intron       25456834//25412662//24981863//25569111 chr10:91163347-91163348(-) m6A CDS//intron       25412662//24981863//25569111//22608085 chr10:91164095-91164096(-) m6A CDS       24981863//22608085 chr10:91164147-91164148(-) m6A CDS       24981863//22608085 chr10:91166053-91166054(-) m6A CDS       25412662 chr10:91171272-91171273(-) m6A CDS       25683224//25412662//24981863//25569111 chr10:91171293-91171294(-) m6A CDS       25683224//25412662//24981863//25569111 chr10:91171392-91171393(-) m6A 5'UTR       25683224//25412662//24981863//25569111 chr10:91171481-91171482(-) m6A 5'UTR       25683224//25412662//24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M87-1
Interactor2: Tmpo

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar