Detail Information

Basic Information:


  VIRBase ID:  

VHID00613418

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M87-1:           Mcm5:      

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Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-M87-1 Mcm5
miRBase
Accession/Entrez ID
MIMAT0005550 17218
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - AA617332//AI324988//AL033333//Cdc46//Mcmd5//P1-CDC46

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Mcm5
chr8:75109637-75109638(+) m6A 5'UTR//intron       25683224//25412662//24981863//25569111
chr8:75109826-75109827(+) m6A CDS       25683224//25412662//25569111
chr8:75110095-75110096(+) m6A CDS       25683224//25412662//25569111
chr8:75110148-75110149(+) m6A CDS       25683224//25412662//25569111
chr8:75110170-75110171(+) m6A CDS       25683224//25412662//25569111
chr8:75110191-75110192(+) m6A CDS       25683224//25412662//25569111
chr8:75110372-75110373(+) m6A CDS       25683224//25412662
chr8:75112547-75112548(+) m6A CDS       25683224//25412662
chr8:75115928-75115929(+) m6A CDS       25683224//25412662
chr8:75115946-75115947(+) m6A CDS       25683224//25412662
chr8:75116003-75116004(+) m6A CDS       25683224//25412662
chr8:75127391-75127392(+) m6A 3'UTR       25456834//24981863//25569111
chr8:75127421-75127422(+) m6A 3'UTR       25456834//24981863//25569111
chr8:75127501-75127502(+) m6A 3'UTR       25456834//24981863//25569111
chr8:75127564-75127565(+) m6A 3'UTR       25456834//24981863//25569111
chr8:75127681-75127682(+) m6A 3'UTR       -

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-M87-1
Interactor2: Mcm5

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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