Basic Information:

  VIRBase ID:  

VHID00613385

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M87-1:  MIMAT0005550          Kcnq2:  NM_001302888     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M87-1	Kcnq2
miRBase Accession/Entrez ID	MIMAT0005550	16536
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	HNSPC//KQT2//Nmf13//Nmf134

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Kcnq2	chr2:181075598-181075599(-) m6A 3'UTR       24981863//22608085 chr2:181075616-181075617(-) m6A 3'UTR       24981863//22608085 chr2:181075700-181075701(-) Y 3'UTR//exon       26075521 chr2:181075704-181075705(-) m6A 3'UTR       24981863//25456834//22608085 chr2:181075754-181075755(-) m6A 3'UTR       24981863//25456834//26404942//22608085 chr2:181075785-181075786(-) m6A 3'UTR       25456834//24981863//26404942//22608085 chr2:181075803-181075804(-) m6A 3'UTR       25456834//24981863//26404942//22608085 chr2:181076085-181076086(-) m6A 3'UTR       24981863 chr2:181076214-181076215(-) m6A 3'UTR//intron       24981863//22608085 chr2:181076221-181076222(-) m6A 3'UTR//intron       24981863//22608085 chr2:181076300-181076301(-) m6A 3'UTR//intron       24981863 chr2:181076347-181076348(-) m6A 3'UTR//intron       24981863 chr2:181076361-181076362(-) m6A 3'UTR//intron       24981863 chr2:181076391-181076392(-) m6A 3'UTR//intron       24981863 chr2:181076481-181076482(-) m6A 3'UTR//intron       24981863//22608085 chr2:181076895-181076896(-) m6A 3'UTR//intron       24981863//22608085 chr2:181077873-181077874(-) m6A 3'UTR//intron       24981863//22608085 chr2:181078753-181078754(-) m6A 3'UTR//intron       24981863 chr2:181078769-181078770(-) m6A 3'UTR//intron       24981863 chr2:181078873-181078874(-) m6A 3'UTR//intron       24981863 chr2:181078949-181078950(-) m6A 3'UTR//intron       24981863//26404942 chr2:181078956-181078957(-) m6A 3'UTR//intron       24981863//26404942 chr2:181078977-181078978(-) m6A 3'UTR//intron       24981863//26404942 chr2:181080998-181080999(-) m6A 3'UTR//intron       24981863//22608085 chr2:181081233-181081234(-) m6A CDS//intron       24981863//22608085 chr2:181081290-181081291(-) m6A CDS//intron       24981863//22608085 chr2:181081467-181081468(-) m6A CDS//intron       24981863//22608085 chr2:181081563-181081564(-) m6A CDS//intron       25683224//24981863//22608085 chr2:181081620-181081621(-) m6A CDS//intron       25683224//25456834//24981863//22608085 chr2:181081638-181081639(-) m6A CDS//intron       25456834//24981863//22608085 chr2:181081699-181081700(-) m6A CDS//intron       25456834//24981863//22608085 chr2:181082335-181082336(-) m6A CDS//intron       24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Kcnq2	Nucleus Neuroblastoma cell line (N2A)     22406755 Nucleus Neuroblastoma cell line (N2A)     22406755 Nucleus Neuroblastoma cell line (N2A)     22406755 Nucleus Neuroblastoma cell line (N2A)     22406755 Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M87-1
Interactor2: Kcnq2

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar