Basic Information:

  VIRBase ID:  

VHID00613039

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m59-2:  MIMAT0005549          Mypop:  NM_145579     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m59-2	Mypop
miRBase Accession/Entrez ID	MIMAT0005549	232934
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	Myod//Myodysa//P4//P42pop

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Mypop	chr7:18991984-18991985(+) m6A 5'UTR//exon       25683224//25412662//24981863//25569111 chr7:18992016-18992017(+) m6A 5'UTR//exon       25683224//25412662//24981863//25569111 chr7:18992154-18992155(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr7:18992194-18992195(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111 chr7:18992290-18992291(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr7:18992463-18992464(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr7:18992483-18992484(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr7:18992596-18992597(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr7:18992791-18992792(+) m6A exon//intron       24981863 chr7:18992984-18992985(+) m6A exon//intron       25683224//24981863 chr7:18993074-18993075(+) m6A exon//intron       25683224//25412662//24981863 chr7:19000731-19000732(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22575960 chr7:19000742-19000743(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22575960 chr7:19000765-19000766(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22575960 chr7:19000809-19000810(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22575960 chr7:19000818-19000819(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:19000861-19000862(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:19000917-19000918(+) m6A CDS       25683224//25412662//25569111 chr7:19001055-19001056(+) m6A CDS       25412662//22608085 chr7:19001608-19001609(+) m6A 3'UTR       25683224//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Mypop	Cytoplasm Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m59-2
Interactor2: Mypop

Evidence Support:

Prediction-Evidence	Rep
Support Database	RepTar