Basic Information:

  VIRBase ID:  

VHID00612743

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m59-1:  MIMAT0005548          Serf2:  NM_011354     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m59-1	Serf2
miRBase Accession/Entrez ID	MIMAT0005548	378702
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	C80083//m4F5r//m4F5rel//Msmac1l

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Serf2	chr2:121450007-121450008(+) m6A CDS//exon       25412662//24981863//25456834//25569111//22608085 chr2:121450015-121450016(+) m1A CDS//exon       26863196 chr2:121450120-121450121(+) m6A exon//intron       25412662//24981863//25569111 chr2:121450133-121450134(+) m6A exon//intron       25412662//24981863//25569111 chr2:121450722-121450723(+) m6A 3'UTR//CDS//exon//intron       24981863 chr2:121450774-121450775(+) m6A 3'UTR//CDS//exon//intron       24981863 chr2:121451170-121451171(+) m6A 3'UTR//exon//intron       25456834//24981863 chr2:121451184-121451185(+) m6A 3'UTR//exon//intron       25456834//24981863 chr2:121451263-121451264(+) m6A 3'UTR//exon//intron       24981863 chr2:121451272-121451273(+) m6A 3'UTR//exon//intron       24981863 chr2:121451312-121451313(+) m6A 3'UTR//exon//intron       24981863 chr2:121451361-121451362(+) m6A 3'UTR//exon//intron       24981863//22608085 chr2:121452223-121452224(+) m6A 3'UTR//exon//intron       24981863//22608085 chr2:121455321-121455322(+) m6A intron       24981863 chr2:121455332-121455333(+) m6A intron       24981863 chr2:121455375-121455376(+) m6A intron       24981863 chr2:121455654-121455655(+) m6A 3'UTR//intron       25412662 chr2:121455660-121455661(+) m6A 3'UTR//intron       25412662 chr2:121455707-121455708(+) m6A 3'UTR//intron       25412662 chr2:121455785-121455786(+) m6A 3'UTR//intron       25412662 chr2:121455807-121455808(+) m6A 3'UTR//intron       25412662 chr2:121455890-121455891(+) m6A intron       25412662 chr2:121456100-121456101(+) m6A 3'UTR//intron       25412662 chr2:121457017-121457018(+) m6A 3'UTR//CDS       25683224//24981863 chr2:121457165-121457166(+) m6A 3'UTR       25683224//25412662//24981863//25456834//25569111 chr2:121457171-121457172(+) m6A 3'UTR       25683224//25412662//24981863//25456834//25569111 chr2:121457209-121457210(+) m6A 3'UTR       25683224//25412662//24981863//25456834//25569111 chr2:121457348-121457349(+) m6A intron       25683224//25412662//24981863//25569111 chr2:121457556-121457557(+) m6A intron       24981863 chr2:121457664-121457665(+) m6A 3'UTR       25683224//25412662//24981863//25569111 chr2:121457680-121457681(+) m6A 3'UTR       25683224//25412662//24981863//25569111 chr2:121457692-121457693(+) m6A 3'UTR       25683224//25412662//24981863//25569111 chr2:121458000-121458001(+) m6A 3'UTR       25683224//25412662//24981863//25569111//22608085 chr2:121458198-121458199(+) m6A 3'UTR       25683224//25412662//24981863//25569111//22608085 chr2:121458260-121458261(+) m6A 3'UTR       25412662//24981863//25569111//22608085 chr2:121458269-121458270(+) m6A 3'UTR       25412662//24981863//25569111//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Serf2	Exosome Mast cells     17486113

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m59-1
Interactor2: Serf2

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar