Basic Information:

  VIRBase ID:  

VHID00612677

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m59-1:  MIMAT0005548          Wscd2:  NM_177292     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m59-1	Wscd2
miRBase Accession/Entrez ID	MIMAT0005548	320916
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	4933413A10Rik//C530024P05Rik//Gm450

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Wscd2	chr5:113550558-113550559(+) m6A 5'UTR//exon       24981863//25569111//22608085 chr5:113550652-113550653(+) m6A 5'UTR//exon       25456834//24981863//25569111//22608085 chr5:113550672-113550673(+) m6A 5'UTR//exon       25456834//24981863//25569111//22608085 chr5:113550759-113550760(+) m6A 5'UTR//exon       24981863//25569111//22608085 chr5:113551172-113551173(+) m6A CDS//exon       25683224//24981863//25569111//22608085 chr5:113551209-113551210(+) m6A CDS//exon       25683224//24981863//25569111//22608085 chr5:113551229-113551230(+) m6A CDS//exon       25683224//24981863//25569111//22608085 chr5:113551395-113551396(+) m6A exon//intron       25683224//24981863 chr5:113558447-113558448(+) m6A CDS       25683224 chr5:113572373-113572374(+) m6A CDS//exon       25456834//22608085 chr5:113572400-113572401(+) m6A CDS//exon       25456834//22608085 chr5:113574033-113574034(+) m6A CDS//exon       25456834//22608085 chr5:113587813-113587814(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr5:113587846-113587847(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr5:113587866-113587867(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr5:113587891-113587892(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr5:113587903-113587904(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr5:113588058-113588059(+) m6A CDS//exon       25456834//24981863//25569111//22608085 chr5:113588086-113588087(+) m6A CDS//exon       25456834//24981863//25569111//22608085 chr5:113588162-113588163(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr5:113588217-113588218(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr5:113588284-113588285(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr5:113588329-113588330(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr5:113588405-113588406(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr5:113588509-113588510(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr5:113588522-113588523(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr5:113588559-113588560(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr5:113588568-113588569(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr5:113588594-113588595(+) m6A 3'UTR//exon       25456834//24981863//25569111//22608085 chr5:113588651-113588652(+) m6A 3'UTR//exon       25456834//25569111 chr5:113589301-113589302(+) m6A 3'UTR//exon       25456834 chr5:113589326-113589327(+) m6A 3'UTR//exon       25456834//24981863 chr5:113589384-113589385(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr5:113589400-113589401(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr5:113589421-113589422(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr5:113589461-113589462(+) m6A 3'UTR//exon       25683224//25456834//24981863//22608085 chr5:113589525-113589526(+) m6A 3'UTR//exon       25683224//25456834//24981863

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m59-1
Interactor2: Wscd2

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar