Basic Information:

  VIRBase ID:  

VHID00612570

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m59-1:  MIMAT0005548          Luzp1:  NM_024452     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m59-1	Luzp1
miRBase Accession/Entrez ID	MIMAT0005548	269593
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2700072H04Rik//AI266952//Lu//Luzp//mFLJ00226

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Luzp1	chr4:136042899(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Luzp1	chr4:136486984(+) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Luzp1	chr4:136521383-136521384(+) m6A 5'UTR//exon//intron       25683224//25412662//24981863//25569111 chr4:136521390-136521391(+) m6A 5'UTR//exon//intron       25683224//25412662//24981863//25569111 chr4:136521473-136521474(+) m6A exon//intron       25683224//25569111 chr4:136539172-136539173(+) m6A 5'UTR//intron       24981863//25569111 chr4:136540355-136540356(+) m6A 5'UTR       25683224//24981863//25569111 chr4:136540465-136540466(+) m6A 5'UTR       25683224//25412662//24981863//25569111 chr4:136540475-136540476(+) m6A CDS       25683224//25412662//24981863//25569111 chr4:136540573-136540574(+) m6A CDS       25683224//25412662//24981863//25569111 chr4:136540603-136540604(+) m6A CDS       25683224//25412662//24981863//25569111 chr4:136540612-136540613(+) m6A CDS       25683224//25412662//24981863//25569111 chr4:136540751-136540752(+) m6A CDS       25683224//24981863//25569111 chr4:136540768-136540769(+) m6A CDS       25683224//24981863 chr4:136540975-136540976(+) m6A CDS       25412662//24981863//25569111 chr4:136540989-136540990(+) m6A CDS       25412662//24981863//25569111 chr4:136541117-136541118(+) m6A CDS       24981863//25569111 chr4:136541128-136541129(+) m6A CDS       24981863//25569111 chr4:136541140-136541141(+) m6A CDS       24981863//25569111 chr4:136541146-136541147(+) m6A CDS       24981863//25569111 chr4:136541254-136541255(+) m6A CDS       24981863//25569111 chr4:136541280-136541281(+) m6A CDS       25412662//24981863//25569111 chr4:136541287-136541288(+) m6A CDS       25412662//24981863//25569111 chr4:136541308-136541309(+) m6A CDS       25456834//25412662//24981863//25569111//22608085 chr4:136541323-136541324(+) m6A CDS       25456834//25412662//24981863//25569111//22608085 chr4:136541338-136541339(+) m6A CDS       25456834//25412662//24981863//25569111//22608085 chr4:136541360-136541361(+) m6A CDS       25456834//25412662//24981863//25569111//22608085 chr4:136541367-136541368(+) m6A CDS       25456834//25412662//24981863//25569111//22608085 chr4:136541378-136541379(+) m6A CDS       25456834//25412662//24981863//25569111//22608085 chr4:136541425-136541426(+) m6A CDS       25456834//25412662//24981863//25569111//22608085 chr4:136541467-136541468(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr4:136541516-136541517(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr4:136541539-136541540(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr4:136541589-136541590(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr4:136541645-136541646(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr4:136541680-136541681(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr4:136541705-136541706(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr4:136541726-136541727(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr4:136541752-136541753(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr4:136541794-136541795(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr4:136541802-136541803(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr4:136541811-136541812(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr4:136541820-136541821(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr4:136541827-136541828(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr4:136541966-136541967(+) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085 chr4:136541988-136541989(+) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085 chr4:136541997-136541998(+) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085 chr4:136542057-136542058(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr4:136542098-136542099(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr4:136542126-136542127(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr4:136542200-136542201(+) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085 chr4:136542219-136542220(+) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085 chr4:136542379-136542380(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr4:136542442-136542443(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr4:136542460-136542461(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr4:136542493-136542494(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr4:136542524-136542525(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr4:136542535-136542536(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr4:136542567-136542568(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr4:136542573-136542574(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr4:136542626-136542627(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr4:136542740-136542741(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr4:136542789-136542790(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr4:136543013-136543014(+) m6A CDS       25683224//24981863//25569111//22608085 chr4:136543161-136543162(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr4:136543195-136543196(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr4:136543202-136543203(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr4:136543240-136543241(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr4:136543258-136543259(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr4:136543282-136543283(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr4:136543324-136543325(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr4:136543334-136543335(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr4:136543364-136543365(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr4:136543422-136543423(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr4:136543465-136543466(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr4:136545250-136545251(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr4:136545302-136545303(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr4:136545320-136545321(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr4:136545345-136545346(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr4:136545388-136545389(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr4:136545467-136545468(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085//22575960 chr4:136545492-136545493(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085//22575960 chr4:136545514-136545515(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085//22575960 chr4:136545575-136545576(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr4:136545582-136545583(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr4:136545657-136545658(+) m6A 3'UTR//intron       25456834//24981863//25569111//22608085 chr4:136545692-136545693(+) m6A 3'UTR//intron       25456834//24981863//25569111//22608085 chr4:136545839-136545840(+) m6A 3'UTR//intron       25456834//24981863//25569111//22608085 chr4:136545860-136545861(+) m6A 3'UTR//intron       25456834//24981863//25569111//22608085 chr4:136545940-136545941(+) m6A 3'UTR//intron       25456834//25412662//24981863//25569111//22608085 chr4:136545978-136545979(+) m6A 3'UTR//intron       25456834//25412662//24981863//25569111//22608085 chr4:136546035-136546036(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr4:136546110-136546111(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr4:136546188-136546189(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr4:136546239-136546240(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr4:136546292-136546293(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr4:136546343-136546344(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085//22575960 chr4:136546388-136546389(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085//22575960 chr4:136546449-136546450(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085//22575960 chr4:136546554-136546555(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085//22575960 chr4:136546599-136546600(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085//22575960 chr4:136546698-136546699(+) m6A 3'UTR//intron       25456834//24981863//25569111//22608085 chr4:136546880-136546881(+) m6A 3'UTR//intron       25569111//22608085 chr4:136548110-136548111(+) Y 3'UTR//exon//intron       26075521

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Luzp1	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m59-1
Interactor2: Luzp1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar