Basic Information:

  VIRBase ID:  

VHID00612552

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m59-1:  MIMAT0005548          Abat:  NM_172961     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m59-1	Abat
miRBase Accession/Entrez ID	MIMAT0005548	268860
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	9630038C02Rik//AI255750//GABA//Gabaat//Gabat//Gm9851//I54//Laibat//X61497

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Abat	chr16:8612501(+) A-I      intronic chr16:8612543(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Abat	chr16:8612408(+) A-I intron -    22524474 chr16:8612450(+) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Abat	chr16:8572929-8572930(+) m6A CDS//exon       25683224//25412662//22608085 chr16:8578288-8578289(+) m6A CDS//exon       25683224//25412662//22608085 chr16:8578347-8578348(+) m6A exon//intron       25683224//22608085 chr16:8578353-8578354(+) m6A exon//intron       25683224//22608085 chr16:8581909-8581910(+) m6A CDS       25683224//22608085 chr16:8581917-8581918(+) m6A CDS       25683224//22608085 chr16:8582821-8582822(+) m6A CDS//intron       25683224//22608085 chr16:8583628-8583629(+) m6A CDS//intron       25683224//22608085 chr16:8588910-8588911(+) m6A CDS       25683224//22608085 chr16:8600926-8600927(+) m6A CDS       25683224//22608085 chr16:8600955-8600956(+) m6A CDS       25683224//22608085 chr16:8600964-8600965(+) m6A CDS       25683224//22608085 chr16:8602357-8602358(+) m6A CDS       25683224//22608085 chr16:8605625-8605626(+) m6A CDS       25683224//22608085 chr16:8608940-8608941(+) m6A CDS       25683224//25412662//22608085 chr16:8608979-8608980(+) m6A CDS       25683224//25412662//22608085 chr16:8611159-8611160(+) m6A CDS//intron       25683224//25412662//22608085 chr16:8611197-8611198(+) m6A CDS//intron       25683224//25412662//22608085 chr16:8612891-8612892(+) m6A exon//intron       25683224//22608085 chr16:8614013-8614014(+) m6A CDS//exon       25683224//22608085 chr16:8614025-8614026(+) m6A CDS//exon       25683224//22608085 chr16:8614067-8614068(+) m6A CDS//exon       25683224//22608085 chr16:8614099-8614100(+) m6A CDS//exon       25683224//22608085 chr16:8614121-8614122(+) m6A CDS//exon       25683224//22608085 chr16:8615975-8615976(+) m6A CDS//exon       25683224//22608085 chr16:8615995-8615996(+) m6A CDS//exon       25683224//22608085 chr16:8618615-8618616(+) m6A CDS       25683224//22608085 chr16:8618734-8618735(+) m6A 3'UTR       25683224//24981863 chr16:8618797-8618798(+) m6A 3'UTR       25683224//24981863//25569111//26404942 chr16:8618875-8618876(+) m6A 3'UTR       25683224//24981863//25569111//26404942 chr16:8618922-8618923(+) m6A 3'UTR       25683224//24981863//25569111//26404942 chr16:8619021-8619022(+) m6A 3'UTR       25683224//24981863//25569111//26404942//22575960 chr16:8619126-8619127(+) m6A 3'UTR       25683224//24981863//25569111//22575960 chr16:8619155-8619156(+) m6A 3'UTR       25683224//24981863//25569111//22575960 chr16:8619298-8619299(+) m6A 3'UTR       25683224//25412662//24981863//25569111//26404942//22575960 chr16:8619345-8619346(+) m6A 3'UTR       25683224//25412662//24981863//25569111//26404942//22575960 chr16:8619378-8619379(+) m6A 3'UTR       25683224//25412662//24981863//25569111//22575960 chr16:8619494-8619495(+) m6A 3'UTR       25683224//25412662//24981863//25569111 chr16:8619523-8619524(+) m6A 3'UTR       25683224//25412662//24981863//25569111 chr16:8619565-8619566(+) m6A 3'UTR       25683224//24981863//25569111 chr16:8619604-8619605(+) m6A 3'UTR       25683224//24981863//25569111//22575960 chr16:8619635-8619636(+) m6A 3'UTR       25683224//24981863//25569111//22575960 chr16:8619726-8619727(+) m6A 3'UTR       25683224//24981863//25569111 chr16:8619745-8619746(+) m6A 3'UTR       25683224//24981863//25569111 chr16:8619762-8619763(+) m6A 3'UTR       25683224//24981863//25569111 chr16:8619813-8619814(+) m6A 3'UTR       25683224//24981863 chr16:8619919-8619920(+) m6A 3'UTR       25683224//24981863 chr16:8619942-8619943(+) m6A 3'UTR       25683224//24981863 chr16:8620002-8620003(+) m6A 3'UTR       25683224//24981863 chr16:8620166-8620167(+) m6A 3'UTR       25683224//24981863//26404942 chr16:8620220-8620221(+) m6A 3'UTR       25683224//24981863//26404942 chr16:8620253-8620254(+) m6A 3'UTR       25683224//24981863//26404942 chr16:8620271-8620272(+) m6A 3'UTR       25683224//24981863//26404942 chr16:8620278-8620279(+) m6A 3'UTR       25683224//24981863//26404942 chr16:8620328-8620329(+) m6A 3'UTR       25683224//24981863//26404942 chr16:8620724-8620725(+) m6A 3'UTR       26404942//22608085 chr16:8620821-8620822(+) m6A 3'UTR       24981863 chr16:8620861-8620862(+) m6A 3'UTR       25683224//24981863 chr16:8620880-8620881(+) m6A 3'UTR       25683224//24981863 chr16:8620888-8620889(+) m6A 3'UTR       25683224//24981863 chr16:8620945-8620946(+) m6A 3'UTR       25683224//24981863 chr16:8620982-8620983(+) m6A 3'UTR       25683224//24981863//26404942 chr16:8621009-8621010(+) m6A 3'UTR       25683224//24981863//26404942 chr16:8621025-8621026(+) m6A 3'UTR       25683224//24981863//26404942 chr16:8621046-8621047(+) m6A 3'UTR       25683224//24981863//26404942 chr16:8621093-8621094(+) m6A 3'UTR       25683224//24981863//26404942//22575960 chr16:8621124-8621125(+) m6A 3'UTR       25683224//24981863//26404942//22575960 chr16:8621194-8621195(+) m6A 3'UTR       26404942 chr16:8621214-8621215(+) m6A 3'UTR       26404942 chr16:8621306-8621307(+) m6A 3'UTR       26404942 chr16:8621380-8621381(+) m6A 3'UTR       24981863//26404942//22608085 chr16:8621403-8621404(+) m6A 3'UTR       24981863//26404942//22608085 chr16:8621413-8621414(+) m6A 3'UTR       24981863//26404942//22608085 chr16:8621465-8621466(+) m6A 3'UTR       24981863//26404942//22608085 chr16:8621495-8621496(+) m6A 3'UTR       24981863//26404942//22608085

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m59-1
Interactor2: Abat

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar