Basic Information:

  VIRBase ID:  

VHID00612514

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m59-1:  MIMAT0005548          Arhgap20:  NM_175535     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m59-1	Arhgap20
miRBase Accession/Entrez ID	MIMAT0005548	244867
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	6530403F17Rik//A530023E23Rik//mKIAA1391//RARhoGAP

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Arhgap20	chr9:51765450-51765451(+) m6A 5'UTR//exon       25412662 chr9:51831680-51831681(+) m6A CDS       25412662//22608085 chr9:51831710-51831711(+) m6A CDS       25412662//22608085 chr9:51831792-51831793(+) m6A CDS//exon       25412662 chr9:51847407-51847408(+) m6A CDS//exon       24981863//25569111 chr9:51848690-51848691(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:51848724-51848725(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:51848964-51848965(+) m6A CDS       25412662//24981863//25569111//22608085 chr9:51848984-51848985(+) m6A CDS       25412662//24981863//25569111//22608085 chr9:51849085-51849086(+) m6A CDS       24981863//25569111//22608085 chr9:51849123-51849124(+) m6A CDS       24981863//25569111//22608085 chr9:51849161-51849162(+) m6A CDS       24981863//25569111//22608085 chr9:51849176-51849177(+) m6A CDS       24981863//25569111//22608085 chr9:51849211-51849212(+) m6A CDS       24981863//25569111//22608085 chr9:51849317-51849318(+) m6A CDS       24981863//25569111//22608085 chr9:51849393-51849394(+) m6A CDS       24981863//25569111//22608085 chr9:51849413-51849414(+) m6A CDS       24981863//25569111//22608085 chr9:51849453-51849454(+) m6A CDS       24981863//25569111//26404942//22608085 chr9:51849630-51849631(+) m6A CDS       24981863//25569111//22608085 chr9:51849635-51849636(+) m6A CDS       24981863//25569111//22608085 chr9:51849713-51849714(+) m6A CDS       25683224//24981863//25569111//22608085 chr9:51849738-51849739(+) m6A CDS       25683224//24981863//25569111//22608085 chr9:51849763-51849764(+) m6A CDS       25683224//24981863//25569111//22608085 chr9:51849793-51849794(+) m6A CDS       25683224//24981863//25569111//22608085 chr9:51849804-51849805(+) m6A CDS       25683224//24981863//25569111//22608085 chr9:51849824-51849825(+) m6A CDS       24981863//25569111//22608085 chr9:51849992-51849993(+) m6A CDS       24981863//25569111//22608085 chr9:51850012-51850013(+) m6A CDS       24981863//25569111//22608085 chr9:51850026-51850027(+) m6A CDS       25412662//24981863//25569111//22608085 chr9:51850034-51850035(+) m6A CDS       25412662//24981863//25569111//22608085 chr9:51850146-51850147(+) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr9:51850156-51850157(+) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr9:51850190-51850191(+) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr9:51850236-51850237(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:51850330-51850331(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:51850362-51850363(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr9:51850387-51850388(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr9:51850405-51850406(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr9:51850457-51850458(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr9:51850463-51850464(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr9:51850478-51850479(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr9:51850484-51850485(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr9:51850537-51850538(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr9:51850630-51850631(+) Y 3'UTR//exon       26075521

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m59-1
Interactor2: Arhgap20

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar