Basic Information:

  VIRBase ID:  

VHID00612492

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m59-1:  MIMAT0005548          Ccdc142:  NM_001081266     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m59-1	Ccdc142
miRBase Accession/Entrez ID	MIMAT0005548	243510
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	A230058J24Rik

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ccdc142	chr6:83101670-83101671(+) m6A 5'UTR//exon       25412662//24981863//25569111 chr6:83101834-83101835(+) m6A CDS//exon       25412662//24981863//25569111 chr6:83101844-83101845(+) m6A CDS//exon       25412662//24981863//25569111 chr6:83101957-83101958(+) m6A CDS//exon       25412662//24981863//25569111 chr6:83102190-83102191(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr6:83102228-83102229(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr6:83102267-83102268(+) m6A CDS//exon       25456834//25412662//24981863//25569111//22608085//22575960 chr6:83102278-83102279(+) m6A CDS//exon       25456834//25412662//24981863//25569111//22608085//22575960 chr6:83102492-83102493(+) m6A CDS//exon       25412662//24981863//25569111//22608085 chr6:83102507-83102508(+) m6A CDS//exon       25683224//25412662//24981863//25569111//22608085 chr6:83102535-83102536(+) m6A CDS//exon       25683224//25412662//24981863//25569111//22608085 chr6:83102569-83102570(+) m6A CDS//exon       25412662//24981863//25569111//22608085 chr6:83102582-83102583(+) m6A CDS//exon       25412662//24981863//25569111//22608085 chr6:83102593-83102594(+) m6A CDS//exon       25412662//24981863//25569111//22608085 chr6:83107099-83107100(+) m6A CDS       25569111 chr6:83107150-83107151(+) m6A CDS//exon       25569111//22608085 chr6:83107672-83107673(+) m6A exon//intron       25412662//25569111 chr6:83107687-83107688(+) m6A exon//intron       25412662//25569111 chr6:83107746-83107747(+) m6A exon//intron       25412662//24981863//25569111 chr6:83107783-83107784(+) m6A CDS//exon       25412662//24981863//25569111 chr6:83107811-83107812(+) m6A CDS//exon       25412662//24981863//25569111 chr6:83107848-83107849(+) m6A CDS       25683224//25412662//24981863//25569111 chr6:83107940-83107941(+) m6A CDS       25683224//25412662//24981863//25569111 chr6:83108110-83108111(+) m6A CDS       25683224//25412662//24981863//25569111 chr6:83108118-83108119(+) m6A CDS       25683224//25412662//24981863//25569111 chr6:83108150-83108151(+) m6A CDS       25683224//25412662//24981863//25569111 chr6:83108192-83108193(+) m6A CDS       25683224//25412662//24981863//25569111 chr6:83108250-83108251(+) m6A CDS       25412662//24981863//25569111 chr6:83108256-83108257(+) m6A CDS       25412662//24981863//25569111 chr6:83108285-83108286(+) m6A CDS       25412662//24981863//25569111 chr6:83108359-83108360(+) m6A CDS       25569111 chr6:83108370-83108371(+) m6A CDS       25569111 chr6:83108387-83108388(+) m6A 3'UTR       24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m59-1
Interactor2: Ccdc142

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar