Detail Information

Basic Information:


  VIRBase ID:  

VHID00612490

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m59-1:           Tmprss11f:      

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Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m59-1 Tmprss11f
miRBase
Accession/Entrez ID
MIMAT0005548 243083
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - 4631408C20//4732406D01Rik

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Tmprss11f
chr5:86523410-86523411(-) m6A 3'UTR       25456834
chr5:86523435-86523436(-) m6A 3'UTR       25456834
chr5:86523489-86523490(-) m6A 3'UTR       25683224//25456834
chr5:86523495-86523496(-) m6A 3'UTR       25683224//25456834
chr5:86523538-86523539(-) m6A 3'UTR       25683224//25456834
chr5:86523550-86523551(-) m6A 3'UTR       25456834
chr5:86523566-86523567(-) m6A 3'UTR       25456834
chr5:86523611-86523612(-) m6A 3'UTR       25456834
chr5:86523690-86523691(-) m6A 3'UTR       25456834
chr5:86523752-86523753(-) m6A 3'UTR       25456834
chr5:86523773-86523774(-) m6A 3'UTR       25456834
chr5:86523810-86523811(-) m6A 3'UTR       25456834
chr5:86523825-86523826(-) m6A 3'UTR       25456834
chr5:86523909-86523910(-) m6A 3'UTR       25456834
chr5:86524022-86524023(-) m6A CDS       25683224//25456834
chr5:86524039-86524040(-) m6A CDS       25683224//25456834
chr5:86524078-86524079(-) m6A CDS       25683224//25456834
chr5:86524098-86524099(-) m6A CDS       25456834

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m59-1
Interactor2: Tmprss11f

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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