Basic Information:

  VIRBase ID:  

VHID00612374

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m59-1:  MIMAT0005548          Zbtb44:  NM_172765     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m59-1	Zbtb44
miRBase Accession/Entrez ID	MIMAT0005548	235132
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	6030404E16Rik//Btbd15//E230011F09

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Zbtb44	chr9:31053307-31053308(+) m6A CDS       24981863//25569111 chr9:31053354-31053355(+) m6A CDS       25683224//25456834//24981863//25569111 chr9:31053378-31053379(+) m6A CDS       25683224//25456834//24981863//25569111 chr9:31053410-31053411(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr9:31053466-31053467(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr9:31053471-31053472(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr9:31053484-31053485(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr9:31053497-31053498(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr9:31053726-31053727(+) m6A CDS       25569111 chr9:31053811-31053812(+) m6A CDS       25569111 chr9:31053898-31053899(+) m6A CDS       25683224//25456834//24981863//25569111 chr9:31053985-31053986(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr9:31054051-31054052(+) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr9:31054122-31054123(+) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr9:31054249-31054250(+) m6A CDS       25683224//24981863//25456834//25569111 chr9:31054266-31054267(+) m6A CDS       25683224//24981863//25456834//25569111 chr9:31054280-31054281(+) m6A CDS       24981863//25456834//25569111 chr9:31064261-31064262(+) m6A CDS       25569111//22608085 chr9:31064265-31064266(+) m6A CDS       25569111 chr9:31064319-31064320(+) m6A CDS       25569111 chr9:31066665-31066666(+) m6A CDS       25569111 chr9:31068761-31068762(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr9:31068770-31068771(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr9:31068787-31068788(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr9:31068813-31068814(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr9:31068936-31068937(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:31068955-31068956(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:31069127-31069128(+) m6A 3'UTR       25456834//24981863//25569111 chr9:31069135-31069136(+) m6A 3'UTR       25456834//24981863//25569111 chr9:31069215-31069216(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr9:31069220-31069221(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr9:31069226-31069227(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr9:31069234-31069235(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr9:31069260-31069261(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr9:31069314-31069315(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr9:31069368-31069369(+) m6A 3'UTR       25569111 chr9:31069421-31069422(+) m6A 3'UTR       25569111 chr9:31071891-31071892(+) Y 3'UTR//exon       26075521 chr9:31074659-31074660(+) m6A 3'UTR       25683224 chr9:31074676-31074677(+) m6A 3'UTR       25683224 chr9:31074708-31074709(+) m6A 3'UTR       25683224 chr9:31074753-31074754(+) m6A 3'UTR       25683224 chr9:31074771-31074772(+) m6A 3'UTR       25683224 chr9:31074898-31074899(+) m6A 3'UTR       25683224//22608085 chr9:31074935-31074936(+) m6A 3'UTR       25683224//25569111//22608085 chr9:31075084-31075085(+) m6A 3'UTR       25683224//25569111//22608085 chr9:31075100-31075101(+) m6A 3'UTR       25683224//25569111//22608085 chr9:31075213-31075214(+) m6A 3'UTR       25569111//22608085 chr9:31075495-31075496(+) Y 3'UTR//exon       26075521 chr9:31075693-31075694(+) Y 3'UTR//exon       26075521

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Zbtb44	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m59-1
Interactor2: Zbtb44

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar