Basic Information:

  VIRBase ID:  

VHID00612346

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m59-1:  MIMAT0005548          Kctd13:  NM_172747     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m59-1	Kctd13
miRBase Accession/Entrez ID	MIMAT0005548	233877
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	1500003N18Rik//AV259508//D5Mgi4//Pd//Pdip1//PDIP1alpha//Po//Poldip1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Kctd13	chr7:134086242(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Kctd13	chr7:126942728(+) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Kctd13	chr7:126928999-126929000(+) m6A 5'UTR       25412662//24981863 chr7:126929004-126929005(+) m6A 5'UTR       25412662//24981863 chr7:126929241-126929242(+) m6A CDS       25412662//22608085 chr7:126930726-126930727(+) m6A CDS//exon       25412662//22608085 chr7:126930782-126930783(+) m6A CDS//exon       25412662//22608085 chr7:126942068-126942069(+) m6A exon//intron       24981863//22608085 chr7:126944917-126944918(+) m6A CDS//exon       24981863//22608085 chr7:126944924-126944925(+) m6A CDS//exon       24981863//22608085 chr7:126945029-126945030(+) m6A CDS       25412662//24981863 chr7:126945116-126945117(+) m6A CDS       25412662//24981863 chr7:126945156-126945157(+) m6A 3'UTR       24981863 chr7:126945411-126945412(+) m6A 3'UTR       24981863 chr7:126945428-126945429(+) m6A 3'UTR       24981863 chr7:126945538-126945539(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Kctd13	Cytoplasm Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m59-1
Interactor2: Kctd13

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar