Detail Information

Basic Information:


  VIRBase ID:  

VHID00612332

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m59-1:           Itpkc:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m59-1 Itpkc
miRBase
Accession/Entrez ID		 MIMAT0005548 233011
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - 9130023N17Rik//IP3K C

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Itpkc
chr7:27207180-27207181(-) m6A 3'UTR       25683224//25456834//24981863//22608085
chr7:27207185-27207186(-) m6A 3'UTR       25683224//25456834//24981863//22608085
chr7:27207295-27207296(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr7:27207365-27207366(-) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085
chr7:27207405-27207406(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr7:27207427-27207428(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr7:27207446-27207447(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr7:27207454-27207455(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr7:27207475-27207476(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr7:27207574-27207575(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr7:27207579-27207580(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr7:27207677-27207678(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22575960
chr7:27207759-27207760(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22575960
chr7:27207776-27207777(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111
chr7:27207949-27207950(-) m6A 3'UTR       25683224//25412662//24981863//25569111
chr7:27207969-27207970(-) m6A 3'UTR//exon       25683224//25412662//24981863//25569111
chr7:27208280-27208281(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr7:27208320-27208321(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr7:27208368-27208369(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111
chr7:27212319-27212320(-) m6A CDS//exon       25683224//25456834//24981863//25569111
chr7:27212346-27212347(-) m6A CDS//exon       25683224//25456834//24981863//25569111
chr7:27212357-27212358(-) m6A CDS//exon       25683224//25456834//25569111
chr7:27212594-27212595(-) m6A exon//intron       25683224//25456834//25569111
chr7:27212626-27212627(-) m6A exon//intron       25683224//25456834
chr7:27212921-27212922(-) m6A exon//intron       25683224//25412662
chr7:27212949-27212950(-) m6A exon//intron       25683224//25412662
chr7:27212972-27212973(-) m6A CDS//exon       25683224//25412662
chr7:27212987-27212988(-) m6A CDS//exon       25683224//25412662
chr7:27213024-27213025(-) m6A CDS//exon       25683224//25412662
chr7:27213048-27213049(-) m6A CDS//exon       25683224//25412662
chr7:27214422-27214423(-) m6A CDS//exon       25683224//25412662
chr7:27214496-27214497(-) m6A CDS       25683224//25412662
chr7:27216969-27216970(-) m6A CDS       25683224//25412662
chr7:27216993-27216994(-) m6A CDS       25683224//25412662
chr7:27217080-27217081(-) m6A CDS       25683224
chr7:27217161-27217162(-) m6A CDS       25683224
chr7:27219606-27219607(-) m6A CDS       25683224
chr7:27219677-27219678(-) m6A CDS       25683224
chr7:27227340-27227341(-) m6A exon//intron       25683224//25412662
chr7:27227360-27227361(-) m6A CDS//exon       25683224//25456834//25412662//25569111
chr7:27227470-27227471(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111
chr7:27227491-27227492(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr7:27227499-27227500(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr7:27227681-27227682(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr7:27227713-27227714(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr7:27227724-27227725(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr7:27227737-27227738(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr7:27227757-27227758(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr7:27227796-27227797(-) m6A CDS//exon       25683224//25456834//24981863//25412662//25569111//22608085
chr7:27227871-27227872(-) m6A CDS//exon       25683224//25456834//24981863//25412662//25569111//22608085
chr7:27227878-27227879(-) m6A CDS//exon       25683224//25456834//24981863//25412662//25569111//22608085
chr7:27227898-27227899(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr7:27227927-27227928(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr7:27227943-27227944(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr7:27227963-27227964(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr7:27227968-27227969(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr7:27227973-27227974(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr7:27228054-27228055(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr7:27228069-27228070(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr7:27228107-27228108(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111
chr7:27228123-27228124(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111
chr7:27228208-27228209(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111
chr7:27228267-27228268(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111
chr7:27228358-27228359(-) m6A CDS//exon       25683224//25412662//24981863//25569111
chr7:27228373-27228374(-) m6A CDS//exon       25683224//25412662//24981863//25569111
chr7:27228581-27228582(-) m6A 5'UTR//exon       24981863

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m59-1
Interactor2: Itpkc

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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