Basic Information:

  VIRBase ID:  

VHID00612278

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m59-1:  MIMAT0005548          Rap1gds1:  NM_145544     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m59-1	Rap1gds1
miRBase Accession/Entrez ID	MIMAT0005548	229877
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	BC011279//GDS//GDS1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Rap1gds1	chr3:138926041-138926042(-) m6A 3'UTR       24981863//22608085 chr3:138926079-138926080(-) m6A 3'UTR       24981863//26404942//22608085 chr3:138926133-138926134(-) m6A 3'UTR       26404942//22608085 chr3:138926190-138926191(-) m6A 3'UTR       26404942//22608085 chr3:138926399-138926400(-) m6A 3'UTR       24981863//26404942//22608085 chr3:138926412-138926413(-) m6A 3'UTR       24981863//26404942//22608085 chr3:138926443-138926444(-) m6A 3'UTR       24981863//26404942//22608085 chr3:138926572-138926573(-) m6A 3'UTR       26404942//22608085 chr3:138926584-138926585(-) m6A 3'UTR       26404942//22608085 chr3:138926847-138926848(-) m6A 3'UTR       26404942//22608085 chr3:138926892-138926893(-) m6A 3'UTR       26404942//22608085 chr3:138926953-138926954(-) m6A 3'UTR       26404942//22608085 chr3:138927293-138927294(-) m6A 3'UTR       24981863//26404942//22608085 chr3:138927386-138927387(-) m6A 3'UTR       25456834//24981863//25569111//26404942 chr3:138927400-138927401(-) m6A 3'UTR       25456834//24981863//25569111//26404942 chr3:138927417-138927418(-) m6A 3'UTR       25456834//24981863//25569111//26404942 chr3:138927451-138927452(-) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr3:138927581-138927582(-) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr3:138927602-138927603(-) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085 chr3:138927642-138927643(-) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085 chr3:138927659-138927660(-) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085 chr3:138957483-138957484(-) m6A 3'UTR//CDS//exon       22608085 chr3:138957500-138957501(-) m6A 3'UTR//CDS//exon       22608085 chr3:138957519-138957520(-) m6A 3'UTR//CDS//exon       22608085 chr3:138958668-138958669(-) m6A 3'UTR//CDS//exon       22608085 chr3:138959071-138959072(-) m6A 3'UTR//CDS//exon       22608085 chr3:139075040-139075041(-) m6A 5'UTR//exon       25412662//25569111 chr3:139075081-139075082(-) m6A 5'UTR//exon       25412662//24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m59-1
Interactor2: Rap1gds1

Evidence Support:

Prediction-Evidence	Rep
Support Database	RepTar