Basic Information:

  VIRBase ID:  

VHID00612237

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m59-1:  MIMAT0005548          Mapkap1:  NM_001362920     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m59-1	Mapkap1
miRBase Accession/Entrez ID	MIMAT0005548	227743
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	AI591529//D230039K05Rik//S//Sin1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Mapkap1	chr2:34406841-34406842(+) m6A 5'UTR       25412662//24981863//25569111 chr2:34406969-34406970(+) m6A 5'UTR//exon//intron       25412662//24981863//25569111 chr2:34406979-34406980(+) m6A 5'UTR//exon//intron       25412662//24981863//25569111 chr2:34407032-34407033(+) m6A 5'UTR//exon//intron       25412662//24981863//25569111 chr2:34407127-34407128(+) m6A 5'UTR//exon//intron       24981863//22608085 chr2:34407203-34407204(+) m6A 5'UTR//exon//intron       25683224//24981863//25569111//22608085 chr2:34429519-34429520(+) m6A 5'UTR//intron       25683224//24981863//25569111//22608085 chr2:34429602-34429603(+) m6A 5'UTR//intron       25683224//24981863//25569111 chr2:34432019-34432020(+) m6A 5'UTR//intron       24981863//25569111 chr2:34432054-34432055(+) m6A 5'UTR//intron       24981863//25456834//25569111 chr2:34432084-34432085(+) m6A CDS//intron       24981863//25456834//25569111 chr2:34432191-34432192(+) m6A CDS//intron       24981863 chr2:34432216-34432217(+) m6A CDS//intron       24981863 chr2:34432300-34432301(+) m6A CDS//intron       24981863 chr2:34432324-34432325(+) m6A CDS//intron       24981863 chr2:34435163-34435164(+) m6A 5'UTR//CDS//intron       24981863 chr2:34435168-34435169(+) m6A 5'UTR//CDS//intron       24981863 chr2:34435214-34435215(+) m6A 5'UTR//CDS//intron       24981863 chr2:34497764-34497765(+) m6A 3'UTR//5'UTR//CDS//exon       25683224//22608085 chr2:34497815-34497816(+) m6A 3'UTR//CDS//exon       25683224//22608085 chr2:34563102-34563103(+) m6A CDS//intron       25683224//22608085 chr2:34563159-34563160(+) m6A CDS//intron       25683224//22608085 chr2:34623481-34623482(+) m6A CDS//exon       25683224//25569111//22608085 chr2:34623490-34623491(+) m6A CDS//exon       25683224//25569111//22608085 chr2:34623495-34623496(+) m6A CDS//exon       25683224//25569111//22608085 chr2:34623503-34623504(+) m6A CDS//exon       25683224//25569111//22608085 chr2:34623600-34623601(+) m6A 3'UTR//exon       25683224//24981863//25569111 chr2:34623632-34623633(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111 chr2:34623691-34623692(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr2:34623697-34623698(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr2:34623798-34623799(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr2:34623818-34623819(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr2:34623855-34623856(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr2:34623862-34623863(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr2:34623899-34623900(+) m6A 3'UTR//exon       25456834//24981863//25569111 chr2:34624004-34624005(+) Y 3'UTR//exon       26075521 chr2:34624577-34624578(+) m6A 3'UTR       24981863 chr2:34624654-34624655(+) m6A 3'UTR       24981863

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m59-1
Interactor2: Mapkap1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar