Basic Information:

  VIRBase ID:  

VHID00612196

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m59-1:  MIMAT0005548          Trpm3:  NM_001362490     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m59-1	Trpm3
miRBase Accession/Entrez ID	MIMAT0005548	226025
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	6330504P12Rik//9330180E14//AU018608//B930001P07Rik//LTR//LTRPC3//ML//MLSN2

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Trpm3	chr19:22918768-22918769(+) m6A CDS       25683224//22608085 chr19:22918798-22918799(+) m6A CDS       25683224//22608085 chr19:22918813-22918814(+) m6A CDS       25683224//22608085 chr19:22978743-22978744(+) m6A CDS       24981863//22608085 chr19:22986863-22986864(+) m6A CDS       24981863 chr19:22986900-22986901(+) m6A CDS       24981863 chr19:22986925-22986926(+) m6A CDS       24981863 chr19:22986932-22986933(+) m6A CDS       24981863 chr19:22986956-22986957(+) m6A CDS       24981863 chr19:22987036-22987037(+) m6A CDS       24981863//22608085 chr19:22987046-22987047(+) m6A CDS       24981863//22608085 chr19:22987103-22987104(+) m6A CDS       24981863//22608085 chr19:22987113-22987114(+) m6A CDS       24981863//22608085 chr19:22987130-22987131(+) m6A CDS       24981863//22608085 chr19:22987147-22987148(+) m6A CDS//intron       24981863//22608085 chr19:22987220-22987221(+) m6A CDS//intron       24981863//22608085 chr19:22987311-22987312(+) m6A CDS//intron       24981863//22608085 chr19:22987337-22987338(+) m6A CDS//intron       24981863//22608085 chr19:22987368-22987369(+) m6A CDS//intron       24981863//22608085 chr19:22987385-22987386(+) m6A CDS//intron       24981863//22608085 chr19:22987538-22987539(+) m6A CDS//intron       24981863//22608085 chr19:22987571-22987572(+) m6A CDS//intron       24981863//22608085 chr19:22987586-22987587(+) m6A CDS//intron       24981863//22608085 chr19:22987607-22987608(+) m6A CDS//intron       24981863//22608085 chr19:22987634-22987635(+) m6A CDS//intron       24981863//22608085 chr19:22987643-22987644(+) m6A CDS//intron       24981863//22608085 chr19:22987649-22987650(+) m6A CDS//intron       24981863//22608085 chr19:22987829-22987830(+) m6A CDS//intron       24981863//22608085 chr19:22987904-22987905(+) m6A CDS//intron       24981863//22608085 chr19:22988042-22988043(+) m6A CDS//intron       24981863//22608085 chr19:22988047-22988048(+) m6A CDS//intron       24981863//22608085 chr19:22988169-22988170(+) m6A CDS//intron       24981863 chr19:22988177-22988178(+) m6A CDS//intron       24981863 chr19:22988240-22988241(+) m6A CDS//intron       24981863//22608085 chr19:22988259-22988260(+) m6A CDS//intron       24981863//22608085 chr19:22988269-22988270(+) m6A CDS//intron       24981863//22608085 chr19:22988308-22988309(+) m6A 3'UTR//intron       24981863//22608085 chr19:22988399-22988400(+) m6A 3'UTR//intron       24981863//22608085 chr19:22988425-22988426(+) m6A 3'UTR//intron       24981863//22608085 chr19:22988435-22988436(+) m6A 3'UTR//intron       24981863//22608085 chr19:22988500-22988501(+) m6A 3'UTR//intron       24981863//22608085 chr19:22988549-22988550(+) m6A 3'UTR//intron       24981863//22608085 chr19:22988556-22988557(+) m6A 3'UTR//intron       24981863//22608085 chr19:22988740-22988741(+) m6A 3'UTR//intron       24981863//22608085 chr19:22988794-22988795(+) m6A 3'UTR//CDS       24981863 chr19:22988894-22988895(+) m6A 3'UTR       24981863//22608085 chr19:22988987-22988988(+) m6A 3'UTR       24981863//22608085 chr19:22989200-22989201(+) m6A 3'UTR       24981863//22608085 chr19:22989330-22989331(+) m6A 3'UTR       24981863

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m59-1
Interactor2: Trpm3

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar