Basic Information:

  VIRBase ID:  

VHID00612089

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m59-1:  MIMAT0005548          Taok1:  NM_001364133     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m59-1	Taok1
miRBase Accession/Entrez ID	MIMAT0005548	216965
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2810468K05Rik//AU020252//D130018F14Rik//Map3k16//Markk//Psk2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Taok1	chr11:77349556(-) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Taok1	chr11:77536054(-) A-I exon 3'UTR    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Taok1	chr11:77529926-77529927(-) Y 3'UTR//exon       26075521 chr11:77531728-77531729(-) m6A 3'UTR       24981863 chr11:77531766-77531767(-) m6A 3'UTR       24981863 chr11:77531774-77531775(-) m6A 3'UTR       24981863 chr11:77531832-77531833(-) m6A 3'UTR       24981863 chr11:77537811-77537812(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr11:77537822-77537823(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr11:77537935-77537936(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr11:77537958-77537959(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr11:77538052-77538053(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:77538115-77538116(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:77540059-77540060(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:77540092-77540093(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr11:77540173-77540174(-) m6A CDS       24981863//25569111 chr11:77541696-77541697(-) m6A CDS       24981863//25569111 chr11:77541708-77541709(-) m6A CDS       24981863//25569111 chr11:77541746-77541747(-) m6A CDS       24981863//25569111 chr11:77541780-77541781(-) m6A CDS       24981863//25569111 chr11:77541785-77541786(-) m6A CDS       24981863//25569111 chr11:77541828-77541829(-) m6A CDS       24981863//25569111 chr11:77545327-77545328(-) m6A CDS       24981863 chr11:77545339-77545340(-) m6A CDS       24981863 chr11:77545386-77545387(-) m6A CDS       24981863 chr11:77545399-77545400(-) m6A CDS       24981863 chr11:77545453-77545454(-) m6A CDS       24981863 chr11:77549461-77549462(-) m6A CDS       25412662//24981863 chr11:77550895-77550896(-) m6A CDS       25412662//24981863 chr11:77550934-77550935(-) m6A CDS       25412662//24981863 chr11:77553696-77553697(-) m6A CDS       24981863 chr11:77553708-77553709(-) m6A CDS       24981863 chr11:77553743-77553744(-) m6A CDS       24981863//22608085 chr11:77553757-77553758(-) m6A CDS       24981863//22608085 chr11:77553774-77553775(-) m6A CDS       24981863//22608085 chr11:77553795-77553796(-) m6A CDS       24981863//22608085 chr11:77553861-77553862(-) m6A CDS       24981863//22608085 chr11:77553870-77553871(-) m6A CDS       24981863//22608085 chr11:77553877-77553878(-) m6A CDS       24981863//22608085 chr11:77553888-77553889(-) m6A CDS       24981863//22608085 chr11:77553900-77553901(-) m6A CDS       24981863//22608085 chr11:77555574-77555575(-) m6A CDS       24981863//22608085 chr11:77555593-77555594(-) m6A CDS       24981863//22608085 chr11:77555648-77555649(-) m6A CDS       24981863//22608085 chr11:77555661-77555662(-) m6A CDS       24981863//22608085 chr11:77559744-77559745(-) m6A CDS       24981863//22608085 chr11:77559784-77559785(-) m6A CDS       24981863//22608085 chr11:77559799-77559800(-) m6A CDS       24981863//22608085 chr11:77559914-77559915(-) m6A CDS       24981863//22608085 chr11:77559920-77559921(-) m6A CDS       24981863//22608085 chr11:77560310-77560311(-) m6A CDS       24981863//22608085 chr11:77560338-77560339(-) m6A CDS       24981863//22608085 chr11:77573760-77573761(-) m6A CDS       24981863//22608085 chr11:77573775-77573776(-) m6A CDS       24981863//22608085 chr11:77607222-77607223(-) m6A 5'UTR       25569111//22608085 chr11:77607515-77607516(-) m6A 5'UTR       25412662 chr11:77607539-77607540(-) m6A 5'UTR       25412662 chr11:77607662-77607663(-) m6A 5'UTR       25412662//24981863//25569111 chr11:77607689-77607690(-) m6A 5'UTR       25412662//24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Taok1	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m59-1
Interactor2: Taok1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar