Detail Information

Basic Information:


  VIRBase ID:  

VHID00612086

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m59-1:           Tom1l2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m59-1 Tom1l2
miRBase
Accession/Entrez ID		 MIMAT0005548 216810
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - 2900016I08Rik//A730055F12Rik//AU042072//Srebf1

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR Tom1l2
chr11:60050335(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED Tom1l2
chr11:60236833(-) A-I intron -    22524474

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Tom1l2
chr11:60227855-60227856(-) m6A 3'UTR//exon       24981863//26404942//22608085
chr11:60227988-60227989(-) m6A 3'UTR//exon       25683224//24981863
chr11:60228005-60228006(-) m6A 3'UTR//exon       25683224//24981863//25569111//22608085
chr11:60228031-60228032(-) m6A 3'UTR//exon       25683224//24981863//25569111//22608085
chr11:60228040-60228041(-) m6A 3'UTR//exon       25683224//24981863//25569111//22608085
chr11:60228162-60228163(-) m6A 3'UTR//exon       25683224//24981863//25569111//22608085
chr11:60228201-60228202(-) m6A 3'UTR//exon       25683224//24981863//25569111//22608085
chr11:60228218-60228219(-) m6A 3'UTR//exon       25683224//24981863//25569111//22608085
chr11:60228292-60228293(-) m6A 3'UTR//exon       25683224//24981863//25569111//22608085
chr11:60228347-60228348(-) m6A 3'UTR//exon       25683224//24981863//25569111
chr11:60228445-60228446(-) m6A 3'UTR//exon       25683224//24981863//25569111//22608085
chr11:60228589-60228590(-) m6A 3'UTR//exon       24981863//22608085
chr11:60228860-60228861(-) m6A 3'UTR//exon       25569111//22608085
chr11:60228972-60228973(-) m6A 3'UTR//exon       24981863//25569111//22608085
chr11:60229513-60229514(-) m6A 3'UTR//exon       24981863//25569111
chr11:60229519-60229520(-) m6A 3'UTR//exon       24981863//25569111
chr11:60229525-60229526(-) m6A 3'UTR//exon       24981863//25569111
chr11:60229635-60229636(-) m6A 3'UTR//exon       25456834//24981863//25569111//22608085//22575960
chr11:60229692-60229693(-) m6A 3'UTR//exon       25456834//25412662//24981863//25569111//22608085//22575960
chr11:60229710-60229711(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr11:60229725-60229726(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr11:60229784-60229785(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr11:60229797-60229798(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr11:60229950-60229951(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr11:60230038-60230039(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr11:60230147-60230148(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111
chr11:60230189-60230190(-) m6A CDS//exon       25683224//25412662//24981863//25569111
chr11:60230199-60230200(-) m6A CDS//exon       25683224//25412662//24981863//25569111
chr11:60241241-60241242(-) m6A 3'UTR//intron       24981863
chr11:60241263-60241264(-) m6A 3'UTR//intron       24981863
chr11:60241288-60241289(-) m6A 3'UTR//CDS//intron       24981863
chr11:60241827-60241828(-) m6A CDS       25683224//22608085
chr11:60241832-60241833(-) m6A CDS       25683224//22608085
chr11:60241859-60241860(-) m6A CDS       25683224//22608085
chr11:60242718-60242719(-) m6A CDS       25683224//22608085
chr11:60242731-60242732(-) m6A CDS       25683224//22608085
chr11:60249051-60249052(-) m6A CDS       25683224//22608085
chr11:60249056-60249057(-) m6A CDS       25683224//22608085
chr11:60258864-60258865(-) m6A CDS//exon       25683224//22608085
chr11:60258931-60258932(-) m6A CDS//exon       25683224//22608085
chr11:60258946-60258947(-) m6A CDS//exon       25683224//22608085
chr11:60261057-60261058(-) m6A CDS//exon       25683224//22608085
chr11:60262685-60262686(-) m6A CDS//exon//intron       25683224//22608085
chr11:60262720-60262721(-) m6A CDS//exon//intron       25683224//22608085
chr11:60270339-60270340(-) m6A CDS//exon//intron       25683224//22608085
chr11:60270405-60270406(-) m6A CDS//exon//intron       25683224//22608085
chr11:60270444-60270445(-) m6A CDS//exon//intron       25683224//22608085
chr11:60270457-60270458(-) m6A CDS//exon//intron       25683224//22608085
chr11:60274951-60274952(-) m6A CDS//exon       25683224//24981863//25412662//22608085
chr11:60274957-60274958(-) m6A CDS//exon       25683224//24981863//25412662//22608085
chr11:60280208-60280209(-) m6A CDS//exon       25683224//25412662//24981863//25569111
chr11:60280236-60280237(-) Y CDS//exon       26075521
chr11:60280244-60280245(-) m6A CDS//exon       25683224//25412662//24981863//25569111
chr11:60280249-60280250(-) m6A CDS//exon       25683224//25412662//24981863//25569111
chr11:60352851-60352852(-) m6A 5'UTR//exon       25683224//25412662//24981863//25569111

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m59-1
Interactor2: Tom1l2

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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