Basic Information:

  VIRBase ID:  

VHID00612030

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m59-1:  MIMAT0005548          Scfd2:  NM_001114660     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m59-1	Scfd2
miRBase Accession/Entrez ID	MIMAT0005548	212986
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	E430013M20Rik//STXBP//STXBP1L1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Scfd2	chr5:74205250-74205251(-) m6A 3'UTR//exon       25412662 chr5:74205263-74205264(-) m6A 3'UTR//exon       25412662 chr5:74206110-74206111(-) m6A 3'UTR//exon//intron       25456834//24981863//22608085 chr5:74206136-74206137(-) m6A 3'UTR//exon//intron       25456834//24981863//22608085 chr5:74206141-74206142(-) m6A 3'UTR//exon//intron       25456834//24981863//22608085 chr5:74458322-74458323(-) m6A 3'UTR//intron       25456834//24981863//25569111//22608085 chr5:74458340-74458341(-) m6A 3'UTR//intron       25456834//24981863//25569111//22608085 chr5:74458416-74458417(-) m6A 3'UTR//exon//intron       25456834//24981863//25569111//22608085 chr5:74458511-74458512(-) m6A 3'UTR//exon//intron       24981863//25569111 chr5:74519522-74519523(-) m6A CDS//exon       25412662//24981863 chr5:74519630-74519631(-) m6A CDS//exon       24981863//25569111 chr5:74519641-74519642(-) m6A CDS//exon       24981863//25569111 chr5:74530796-74530797(-) m6A CDS//exon       25683224//24981863//25569111 chr5:74530835-74530836(-) m6A CDS//exon       25683224//24981863//25569111 chr5:74530846-74530847(-) m6A CDS//exon       25683224//24981863//25569111 chr5:74530935-74530936(-) m6A CDS//exon       24981863//25569111 chr5:74531046-74531047(-) m6A CDS//exon       24981863 chr5:74531176-74531177(-) m6A CDS//exon       25683224//25412662//24981863 chr5:74531217-74531218(-) m6A CDS//exon       25683224//25412662//24981863 chr5:74531359-74531360(-) m6A CDS//exon       25683224//25412662//24981863//25569111 chr5:74531439-74531440(-) m6A CDS//exon       25683224//25412662 chr5:74531646-74531647(-) m6A 5'UTR//exon       24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m59-1
Interactor2: Scfd2

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar