Basic Information:

  VIRBase ID:  

VHID00611754

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m59-1:  MIMAT0005548          Cggbp1:  NM_178647     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m59-1	Cggbp1
miRBase Accession/Entrez ID	MIMAT0005548	106143
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	AA960172//AL023996//AW045841

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Cggbp1	chr16:64852013-64852014(+) m6A 5'UTR       25412662//24981863//25569111 chr16:64852803-64852804(+) m6A 5'UTR//exon       25412662//24981863//25569111 chr16:64852849-64852850(+) m6A 5'UTR//exon       25683224//24981863//25569111 chr16:64852878-64852879(+) m6A 5'UTR//exon       25683224//24981863//25569111 chr16:64852959-64852960(+) m6A 5'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr16:64852986-64852987(+) m6A 5'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr16:64852994-64852995(+) m6A 5'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr16:64853004-64853005(+) m6A 5'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr16:64855554-64855555(+) m6A 5'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr16:64855567-64855568(+) m6A 5'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr16:64855620-64855621(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr16:64855691-64855692(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr16:64855767-64855768(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr16:64855863-64855864(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr16:64855888-64855889(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr16:64856002-64856003(+) m6A CDS       25456834//25412662//24981863//25569111 chr16:64856227-64856228(+) m6A 3'UTR       24981863//25569111 chr16:64856240-64856241(+) m6A 3'UTR       24981863//25569111 chr16:64856280-64856281(+) m6A 3'UTR       24981863//25569111 chr16:64856312-64856313(+) m6A 3'UTR       25456834//24981863//25569111 chr16:64856332-64856333(+) m6A 3'UTR       25456834//24981863//25569111 chr16:64856371-64856372(+) m6A 3'UTR       25456834//24981863//25569111 chr16:64856373-64856374(+) Y 3'UTR//exon       26075521 chr16:64856450-64856451(+) m6A 3'UTR       25456834//24981863//25569111 chr16:64856463-64856464(+) m6A 3'UTR       25456834//24981863//25569111 chr16:64856497-64856498(+) m6A 3'UTR       25456834//24981863//25569111 chr16:64856652-64856653(+) m6A 3'UTR       24981863//25569111//26404942 chr16:64856685-64856686(+) m6A 3'UTR       24981863//25569111//26404942 chr16:64856762-64856763(+) m6A 3'UTR       24981863//25569111 chr16:64856776-64856777(+) m6A 3'UTR       24981863//25569111 chr16:64858462-64858463(+) m6A 3'UTR       24981863//22608085 chr16:64858522-64858523(+) m6A 3'UTR       24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Cggbp1	Cytoplasm Neuroblastoma cell line (N2A)     22406755 Exosome Mast cells     17486113

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m59-1
Interactor2: Cggbp1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar