Basic Information:

  VIRBase ID:  

VHID00610985

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m59-1:  MIMAT0005548          Ccdc50:  NM_001025615     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m59-1	Ccdc50
miRBase Accession/Entrez ID	MIMAT0005548	67501
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	C3orf6

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ccdc50	chr16:27388984-27388985(+) m6A 5'UTR       25412662//25569111 chr16:27389969-27389970(+) m6A CDS//exon//intron       25412662//25569111 chr16:27406734-27406735(+) m6A CDS       25412662//24981863//22608085 chr16:27409326-27409327(+) m6A CDS       25412662//24981863//22608085 chr16:27417303-27417304(+) m6A CDS       25412662//24981863 chr16:27435568-27435569(+) m6A CDS       25412662//24981863 chr16:27435621-27435622(+) m6A CDS       25412662//24981863 chr16:27435670-27435671(+) m6A CDS       25412662//24981863 chr16:27436380-27436381(+) m6A CDS//intron       25412662//24981863 chr16:27436573-27436574(+) m6A CDS       25683224//24981863 chr16:27436583-27436584(+) m6A CDS       25683224//24981863 chr16:27438430-27438431(+) m6A 3'UTR//intron       25683224//24981863 chr16:27438451-27438452(+) m6A 3'UTR//intron       25683224//24981863 chr16:27439613-27439614(+) m6A 3'UTR//intron       24981863//22608085 chr16:27444575-27444576(+) m6A CDS       24981863//25569111 chr16:27444599-27444600(+) m6A CDS       24981863//25569111 chr16:27446277-27446278(+) m6A 3'UTR       24981863//25456834//25569111 chr16:27446304-27446305(+) m6A 3'UTR       24981863//25456834//25569111 chr16:27446452-27446453(+) m6A 3'UTR       24981863 chr16:27446502-27446503(+) m6A 3'UTR       24981863 chr16:27446599-27446600(+) m6A 3'UTR       - chr16:27447068-27447069(+) m6A 3'UTR       24981863 chr16:27447082-27447083(+) m6A 3'UTR       24981863 chr16:27447357-27447358(+) m6A 3'UTR       24981863 chr16:27447464-27447465(+) m6A 3'UTR       24981863 chr16:27447493-27447494(+) m6A 3'UTR       24981863 chr16:27447526-27447527(+) m6A 3'UTR       24981863 chr16:27447536-27447537(+) m6A 3'UTR       24981863 chr16:27448922-27448923(+) m6A 3'UTR       24981863 chr16:27448946-27448947(+) m6A 3'UTR       24981863 chr16:27449435-27449436(+) m6A 3'UTR       24981863 chr16:27451709-27451710(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085 chr16:27451744-27451745(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr16:27451782-27451783(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr16:27451793-27451794(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr16:27451837-27451838(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m59-1
Interactor2: Ccdc50

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar