Basic Information:

  VIRBase ID:  

VHID00610899

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m59-1:  MIMAT0005548          Serbp1:  NM_025814     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m59-1	Serbp1
miRBase Accession/Entrez ID	MIMAT0005548	66870
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	1200009K13Rik//9330147J08Rik//AL022786//Pairbp1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Serbp1	chr6:67267172-67267173(+) m6A CDS//exon//intron       25412662//24981863//25569111 chr6:67267202-67267203(+) m6A CDS//exon//intron       25412662//24981863//25569111 chr6:67267276-67267277(+) m6A CDS//exon//intron       25412662//24981863//25569111 chr6:67267299-67267300(+) m6A CDS//exon//intron       25412662//24981863//25569111 chr6:67267325-67267326(+) m6A CDS//exon//intron       25412662//24981863//25569111 chr6:67267334-67267335(+) m6A CDS//exon//intron       25412662//24981863//25569111 chr6:67268170-67268171(+) m6A exon//intron       25683224 chr6:67269302-67269303(+) m6A exon//intron       24981863 chr6:67269333-67269334(+) m6A exon//intron       24981863 chr6:67271216-67271217(+) m1A CDS//exon       26863196 chr6:67271219-67271220(+) m6A CDS//exon       25412662//24981863 chr6:67271249-67271250(+) m6A CDS//exon       25412662//24981863 chr6:67271886-67271887(+) m6A CDS//exon//intron       24981863//22608085 chr6:67272084-67272085(+) m6A exon//intron       24981863//22608085 chr6:67272104-67272105(+) m6A exon//intron       24981863//22608085 chr6:67272173-67272174(+) m6A 3'UTR//CDS//exon//intron       24981863 chr6:67272208-67272209(+) m6A 3'UTR//CDS//exon//intron       24981863 chr6:67272273-67272274(+) m6A exon//intron       24981863 chr6:67272279-67272280(+) m6A exon//intron       24981863 chr6:67272787-67272788(+) m6A exon//intron       24981863 chr6:67272842-67272843(+) m6A CDS//exon//intron       24981863 chr6:67272894-67272895(+) m6A 3'UTR//CDS//exon//intron       25683224//24981863 chr6:67273039-67273040(+) m6A exon//intron       25683224//24981863//25456834 chr6:67273055-67273056(+) m6A exon//intron       25683224//25456834 chr6:67274566-67274567(+) m6A exon//intron       24981863//25569111//22608085 chr6:67277840-67277841(+) m6A 3'UTR//CDS//exon//intron       24981863//25569111 chr6:67277871-67277872(+) m6A 3'UTR//CDS//exon//intron       24981863//25569111 chr6:67277892-67277893(+) m6A 3'UTR//CDS//exon//intron       24981863//25569111 chr6:67281672-67281673(+) m6A 3'UTR//CDS//exon//intron       24981863//25569111 chr6:67281732-67281733(+) m6A 3'UTR//CDS//exon//intron       24981863//25569111 chr6:67281798-67281799(+) m6A 3'UTR//CDS//exon       24981863//25569111//22608085 chr6:67281812-67281813(+) m6A 3'UTR//CDS//exon       24981863//25569111//26404942//22608085 chr6:67283994-67283995(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085 chr6:67284034-67284035(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085 chr6:67284039-67284040(+) Y 3'UTR//exon       26075521 chr6:67284070-67284071(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085//22575960 chr6:67284099-67284100(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085//22575960 chr6:67284126-67284127(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085//22575960 chr6:67284275-67284276(+) m6A 3'UTR       24981863//25456834//25569111//22608085 chr6:67284294-67284295(+) m6A 3'UTR       24981863//25456834//25569111//22608085 chr6:67284388-67284389(+) m6A 3'UTR       25569111//22608085 chr6:67284441-67284442(+) m6A 3'UTR       25569111//22608085 chr6:67284449-67284450(+) m6A 3'UTR       25569111//22608085 chr6:67284602-67284603(+) Y 3'UTR//exon       26075521 chr6:67286266-67286267(+) Y 3'UTR//exon       26075521 chr6:67290338-67290339(+) m6A 3'UTR       24981863//22608085 chr6:67291914-67291915(+) m6A 3'UTR       24981863 chr6:67292085-67292086(+) m6A 3'UTR       24981863 chr6:67292122-67292123(+) m6A 3'UTR       24981863 chr6:67292149-67292150(+) m6A 3'UTR       24981863 chr6:67292164-67292165(+) m6A 3'UTR       24981863 chr6:67292292-67292293(+) m6A 3'UTR       24981863//22608085 chr6:67292653-67292654(+) m6A 3'UTR       24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Serbp1	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m59-1
Interactor2: Serbp1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar