Basic Information:

  VIRBase ID:  

VHID00610704

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m59-1:  MIMAT0005548          Rps6ka4:  NM_019924     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m59-1	Rps6ka4
miRBase Accession/Entrez ID	MIMAT0005548	56613
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	1110069D02Rik//90kD//90kDa//AI848992//mMSK2//MSK//Msk2

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Rps6ka4	chr19:6829320-6829321(-) m6A 3'UTR       25456834//24981863//25569111 chr19:6829330-6829331(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr19:6829358-6829359(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr19:6829384-6829385(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr19:6829408-6829409(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr19:6829427-6829428(-) m6A 3'UTR       25456834//24981863//25569111 chr19:6829619-6829620(-) m6A 3'UTR       24981863//25569111 chr19:6829684-6829685(-) m6A 3'UTR       24981863//25569111 chr19:6829873-6829874(-) m6A 3'UTR       24981863//25569111 chr19:6830692-6830693(-) m6A CDS       25412662//22608085 chr19:6831085-6831086(-) m6A CDS       25683224//25412662 chr19:6831279-6831280(-) m6A CDS       25683224//25412662 chr19:6831396-6831397(-) m6A CDS       25412662 chr19:6831849-6831850(-) m6A CDS       25683224//25412662//22608085 chr19:6832052-6832053(-) m6A CDS       25683224//22608085 chr19:6832057-6832058(-) m6A CDS       25683224//22608085 chr19:6835257-6835258(-) m6A CDS       25412662 chr19:6837393-6837394(-) m6A CDS       25412662//22608085 chr19:6837420-6837421(-) m6A CDS       25412662//22608085 chr19:6837600-6837601(-) m6A CDS       25683224//25412662 chr19:6837675-6837676(-) m6A CDS       25683224//25412662 chr19:6837764-6837765(-) m6A CDS       25683224//25412662 chr19:6837826-6837827(-) m6A CDS       25683224 chr19:6838088-6838089(-) m6A CDS       25683224//22608085 chr19:6838142-6838143(-) m6A CDS       25683224//25412662//22608085 chr19:6839263-6839264(-) m6A CDS       25683224//25412662//22608085 chr19:6839573-6839574(-) m6A CDS       25412662//22608085 chr19:6840365-6840366(-) m6A CDS       25412662//24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m59-1
Interactor2: Rps6ka4

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar