Basic Information:

  VIRBase ID:  

VHID00610688

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m59-1:  MIMAT0005548          Pfkp:  NM_019703     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m59-1	Pfkp
miRBase Accession/Entrez ID	MIMAT0005548	56421
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	1200015H23Rik//9330125N24Rik//ATP-PFK//PFK-//PFK-C//PFK-P

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Pfkp	chr13:6579842-6579843(-) m6A 3'UTR//exon       25412662//24981863 chr13:6579850-6579851(-) m6A 3'UTR//exon       25412662//24981863 chr13:6579891-6579892(-) m6A 3'UTR//exon       25412662//24981863 chr13:6580042-6580043(-) m6A 3'UTR//exon       24981863 chr13:6580048-6580049(-) m6A 3'UTR//exon       24981863 chr13:6581280-6581281(-) m6A 3'UTR//exon       24981863//22608085 chr13:6581287-6581288(-) m6A 3'UTR//exon       24981863//22608085 chr13:6581295-6581296(-) m6A 3'UTR//exon       24981863//25569111//22608085 chr13:6581410-6581411(-) m6A 3'UTR//exon       24981863//25569111//26404942 chr13:6581465-6581466(-) m6A CDS//exon       24981863//26404942 chr13:6581558-6581559(-) m6A CDS//exon       24981863//22608085 chr13:6586181-6586182(-) m6A exon//intron       24981863 chr13:6594382-6594383(-) m6A exon//intron       24981863//22608085 chr13:6594441-6594442(-) m6A exon//intron       24981863 chr13:6594503-6594504(-) m6A exon//intron       24981863 chr13:6594523-6594524(-) m6A exon//intron       24981863 chr13:6595647-6595648(-) m6A exon//intron       24981863 chr13:6595663-6595664(-) m6A exon//intron       24981863 chr13:6600602-6600603(-) m6A CDS//exon       25412662//22608085 chr13:6600624-6600625(-) m6A CDS//exon       25412662//22608085 chr13:6600629-6600630(-) m6A CDS//exon       25412662//22608085 chr13:6602406-6602407(-) m6A exon//intron       25412662//22608085 chr13:6603102-6603103(-) m6A CDS//exon       22608085 chr13:6604995-6604996(-) m6A CDS//exon       24981863//22608085 chr13:6605026-6605027(-) m6A CDS//exon       24981863//22608085 chr13:6636599-6636600(-) m6A 5'UTR//intron       25412662//24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Pfkp	Axon Motor neuron-like NSC-34 cells     24152552

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m59-1
Interactor2: Pfkp

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar